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52-0749-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 4; Position: 17949227 [Map]; Strand: w
      • AT4G38320.1 - [+] show detail - heptahelical protein 5
        Distance: 0; Region: exon2 (CDS)
    Flanking Genome Sequence: 52-0749-1 - 5-prime edge 
    AAAGGGAAGA GGTTATGGCA GAAAGTCAAG TATCAATTGG TGGAGTTTCA 
    TTCATTGCCT GCTTATTTAA GAGACAATGA GTACATCATT GGTCATTACC 
    GATCCGAATG GCCGATCAAA CAGATTCTTC TCAGCATCTT TACCATTCAT 
    AATGAGACTT TGAATGTTTG GACGTAAGTG TTGAATCATG TTTCTTGATG 
    TATCCTTGTT TAAAGTTCAA GAAACCTTGA GTGTGTTTGT GTGTGTGTGT 
    TCTTTGGGAT TTGCAGGCAT TTGATTGGGT TTTTCCTGTT TTTGGCACTC 
    ACTATATACA CTGCAACGAA AGTACCGAGT GTCGTGGATC TTCATTCGCT 
    TCAACACCGT TTACCCGATT TGTTGAGGAA AACAGATCTC CACAAACTTC 
    ATTCTGAGCT CATGTCTCGC CTTCCTTCTA GTCCATCTAG TTGGCATGTG 
    ATGGACCTTC TTTATAACTG TTTGCCTGAA AGATTTTCTC ATGGCAACTA 
    CACTGACATG TGTGTTCTGG TAAGAAAAGA CTCAATCTTT CTCTCTATTC 
    CTGCAGATTA CTGTTTCAAA ATGTGGCCAA GTTCATGTCT TTGTAATTGC 
    ATTGCAGCAT TCTGTGAGGG AAGATCTTGC AAACTTGATA GCTCCTTTGA 
    TCTTCAGGCC AATTACTCGA TGGCCGTTTT ATGCATTTCT AGGNGGNGCT 
    ATATTCTGTC TATTANCAN

  • 3 prime edge [+] show sequence

    1. Chromosome: 4; Position: 17949111 [Map]; Strand: w
      • AT4G38320.1 - [+] show detail - heptahelical protein 5
        Distance: 0; Region: exon2 (CDS)
    Flanking Genome Sequence: 52-0749-1 - 3-prime edge 
    TTCCCTTTCA CATTATGTTT CTTGTCTATT GTTTCAGATG AAGCT

AT4G38320.1

Model type
Protein coding
Short Description
heptahelical protein 5
Curator Summary
heptahelical transmembrane protein HHP5
Computational Description
heptahelical protein 5 (HHP5); FUNCTIONS IN: receptor activity; INVOLVED IN: response to hormone stimulus, response to sucrose stimulus; LOCATED IN: integral to membrane; EXPRESSED IN: 7 plant structures; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage; CONTAINS InterPro DOMAIN/s: Hly-III related (InterPro:IPR004254); BEST Arabidopsis thaliana protein match is: heptahelical protein 4 (TAIR:AT4G37680.2); Has 2557 Blast hits to 2136 proteins in 523 species: Archae - 0; Bacteria - 635; Metazoa - 1083; Fungi - 463; Plants - 198; Viruses - 0; Other Eukaryotes - 178 (source: NCBI BLink).
Link
InterPro Scan - TAIR