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52-0750-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 5; Position: 13468739 [Map]; Strand: w
      • AT5G35205.1 - [+] show detail - transposable element gene
        Distance: 0; Region: exon1 (NonCoding)
    Flanking Genome Sequence: 52-0750-1 - 5-prime edge 
    AGNGNNCGGA TANACNNTCT GGGGCCTGGA TATANGTTGG TATGCNTCGT 
    NAANNNCNGG TTTTTATCTC NTCTNCCGAN NCCTCNTGCG TNNGCATNAT 
    CGTATCCTCC TTANCACATT TGAATTCCAG TAGCTCTGCC CNCTCTTNTN 
    TTNANANTGC NCNATAATCC GGAGGTTTGA CAGTGAGGA

  • 3 prime edge [+] show sequence

    1. Chromosome: 5; Position: 13468625 [Map]; Strand: w
      • AT5G35205.1 - [+] show detail - transposable element gene
        Distance: 0; Region: exon1 (NonCoding)
    Flanking Genome Sequence: 52-0750-1 - 3-prime edge 
    CTTGTGAGTT CTTCAAAGAA ACTTGGTCAA TCGTTGGACG TGATTTCGTG 
    GTAGCTATCC AGTCTTTCTT TAAGACAGGA TTTTTACCGA AAGGAGTTAA 
    CTTAACTATC TTAGCCTTGA TACCGAAGAA AAAAAAGCCA TTTATATGAA 
    GGATTACAGA CCAATCTCCT GCTGCAATGT TCTTTACAAG GTTATATCGA 
    AGATTCTGGC AAATAGGCTC AAGATCATTT TGCCAAAATT CATTACACCA 
    AATCAATCAG CATTCATCAA GGATAGATTG CTAATGGAAA ATTTACTCCT 
    TGCCACAGAA GTAATCAAAG ACTACCACAA AGAATCGATC TCCCCTCGGT 
    GCGCAATGAA AATAGATATC TCAAAGGCTT TTGACTCAGT TCAATGGGGG 
    TTTCTTCTTA ACACGCTGCG AGCTCTAGAC ATTCCTGAAC AATACATTAA 
    GTGGATC

AT5G35205.1

Model type
Transposable element gene
Short Description
transposable element gene
Computational Description
non-LTR retrotransposon family (LINE), has a 1.1e-36 P-value blast match to GB:BAA20419 reverse transcriptase (LINE-element) (Mus musculus)
Link
InterPro Scan - TAIR