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52-0779-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

Notice

More than one insertion position or no insertion point is expected.

  • 5 prime edge [+] show sequence

    1. Chromosome: 1; Position: 25979992 [Map]; Strand: c
      • AT1G69100.1 - [+] show detail - Eukaryotic aspartyl protease family protein
        Distance: -7; Region: promoter
    Flanking Genome Sequence: 52-0779-1 - 5-prime edge 
    GTGAAAAACT AACAAAATCG GTTATACGAT AACGGTCGGT ACGGGATTTT 
    CCCATCCTAC TTTCATCCCT TCCTTGTGGA GAAGCTCATG ATCGATGATA 
    GAAAATTATT GAAAAGTGTC AAGAGGAGAT ATGGGAGACT ATGATATGTT 
    TCTTTGTGTA CATATAAATA TATAATTTCC TCTTAAATTA GCAGTCTGTA 
    CGTATTAAAT ACCATGCTAG AATAGAAACA TAATGGTTCA TGCATGCATA 
    TAAACTTAGC TAAAATGTTC GCCATAAATC AAAAGTAGAC CGTAGACATT 
    TTGAAAGAAA TTTCCTAATT GGAAATACTA TTAAATACCA TGGTAGAATA 
    GAAACAGAGT GGTTCATCAT GCATCTTAAC TTTAGCTAAA ATAAATGTTC 
    GATCAATATG CATCACATGA TCGCAAATAT AATAGGGAAA GACTATTTAT 
    TGTAGGCTCA TAATTCTTTA CCCTCAATTT TACAGAAATT TAAATAACAA 
    AAATCAAAAT TCCTAATTTT CTTTAGAAAA ATAATAATAG CAATCCCTTA 
    ATCCAAAACC TCTAGTTGAC CTAGAGACTT ATACCAAACT CTTAATTAAA 
    ACCTTAAGCA AAGATACTCC CAAATTGGCT ATGGATAAAC AATGAAACAC 
    AAGTCATGGT TATATGATTG CAATCCTCAC ATCAAAATTA TATATCAGCT 
    TGCGACGTTG GATATTTTGT TACAGATCGG ATGCGTAATA ATCGTATTTG 
    GTTATGGGAT ACATGTAGAC CATGACTTGT ATTTT

  • 3 prime edge [+] show sequence

    1. Chromosome: 1; Position: 26749542 [Map]; Strand: w
      • AT1G70944.1 - [+] show detail - unknown protein; Has 30201 Blast hits to 17322 proteins in 780 species: Archa...
        Distance: -289; Region: promoter
    Flanking Genome Sequence: 52-0779-1 - 3-prime edge 
    ATGAAAACGG TAGAGGTATT TTACCGACCG TTACCGACCG TTTTCATTCA 
    AAAGTGTAGG GACAAAGAGA CTATTTGGAT CTACGTTCGC AAAATGTGAT 
    CCACATATTT TTTTTCTTTC TTTTTCTTCG ACAGGTATAA TGTGACTAGC 
    GATCCATTGC CTTCAACATA TATGGGACAA CTAAGTCACA GTTGTTTTTT 
    TCTTTCTTCG ATAGGGTCCA TTTTTTTGTT ACTTCAATTG AATGTCTTTG 
    CATTCAATTG GATAGTACAT AGCTCTTATC TATTCCACGT CCATTTTTTC 
    CATTCTAGTT TCATTAATCA TCTTCAAAGG TTTGTTCGTT CAATGAACGG 
    ATTATGCGTT CGTGTTTACT ACGTCCCTAC CCTACGCTTT GCCCATCGTG 
    TTGTAGGGTG GATCGTTCTA GTTTATGCCA AAGCCGTTTA CATGCATGGC 
    CCAATTTGAT CAAATCAAGG AAAGCAATGT TATAACGGGA AAAATCCAAT 
    GGAGATAAAC GTAACAGATG GTGCCAATGA AGAGAATTTG TGAGCACATG 
    AGAAGACTGG GCAGTGGATA ATACTAAATA ATAATATATA GAGACATCCT 
    GTGCAAGTAG AAGAGAAGCA AACAAGCAAG AAACGTTCAT ATATACTTTG 
    AGATTATTCA CTTTTTGCTA AAATGTACAC TAGCTATTAT TACTTAGGGT 
    ATGCACATGT GGGATACAAA CGCCGGCTCA ATAATAATAG AAATCGNATG 
    TTAAGCGGAC TATNCAGCTC ATGCNGGANA AATGGT

AT1G69100.1

Model type
Protein coding
Short Description
Eukaryotic aspartyl protease family protein
Computational Description
Eukaryotic aspartyl protease family protein; FUNCTIONS IN: aspartic-type endopeptidase activity; INVOLVED IN: proteolysis; LOCATED IN: endomembrane system; EXPRESSED IN: embryo, pedicel; EXPRESSED DURING: 4 anthesis, C globular stage; CONTAINS InterPro DOMAIN/s: Peptidase aspartic (InterPro:IPR021109), Peptidase aspartic, catalytic (InterPro:IPR009007), Peptidase A1 (InterPro:IPR001461), Peptidase aspartic, active site (InterPro:IPR001969); BEST Arabidopsis thaliana protein match is: Eukaryotic aspartyl protease family protein (TAIR:AT4G22050.1); Has 4613 Blast hits to 4429 proteins in 406 species: Archae - 0; Bacteria - 4; Metazoa - 2078; Fungi - 1459; Plants - 462; Viruses - 0; Other Eukaryotes - 610 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT1G70944.1

Model type
Protein coding
Computational Description
unknown protein; Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Link
InterPro Scan - TAIR