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52-0815-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 5; Position: 23223260 [Map]; Strand: c
      • AT5G57330.1 - [+] show detail - Galactose mutarotase-like superfamily protein
        Distance: 2171; Region: intergenic
      • AT5G57340.1 - [+] show detail - unknown protein; Has 30201 Blast hits to 17322 proteins in 780 species: Archa...
        Distance: -2826; Region: intergenic
    Flanking Genome Sequence: 52-0815-1 - 5-prime edge 
    CCTAAACAAT TAACTATTAA AAATGGAAAT CATTCAAAAA TATTTGATTT 
    TTTCAAAACA TGAAGTAGCT CACAACAAAA ACGCATTTGA ATTAACCTGA 
    TTTAATAACA TTTTCTTTGA TATCACTAGT AAAGTAAAGA TATTTGGATC 
    ATATAATGAC TTTATGATCC CCTAACTAAA AATCATGTTA TGTGAGAATA 
    AATGATGATA ATTCATGAAA CTTATCACTA AAGTAAAAAA CAGTGAAAAC 
    AAGTGGTGAT TTGGTCATAT TATGATATGA TGTGAATATT GTTAATAAGG 
    GAGTTAATAA AAGTGAAGTG ACGGCATGTG GAAGCAAAGA GAGAGAGATA 
    GATAGATTTG GGATTAAATT TTGTAATAAT AATAAGAAAA AGAGTAAGCA 
    CGCGTTGTAG CCTTTCTAAC GTACATTCTG GGTCCTAATT CCTACCCCAC 
    TATAGTGACT ATACACACAT GACACATCCA CATTTTATTT ATTTATTTTG 
    CATATTATTT ACATAACGAA TTATGAACAG CATAATCTAT ATAATATACC 
    TATAATCTTG TATATTTTAT CTATATATTT CCTTAAAAAA TTAAAATAAA 
    TAACTGTAAC TATAATTTTA TTAGTATCCG ATATCCGGTC ATCAATATTA 
    GATAATATAA TAGATACCAC ACATGACACA AAAGATCAAA ATCCAATAAC 
    GCAACAT

  • 3 prime edge [+] show sequence

    1. Chromosome: 5; Position: 23223404 [Map]; Strand: c
      • AT5G57330.1 - [+] show detail - Galactose mutarotase-like superfamily protein
        Distance: 2315; Region: intergenic
      • AT5G57340.1 - [+] show detail - unknown protein; Has 30201 Blast hits to 17322 proteins in 780 species: Archa...
        Distance: -2682; Region: intergenic
    Flanking Genome Sequence: 52-0815-1 - 3-prime edge 
    TGTTTAGGTA TAACAACAAT TAAAAAATGT AATTCATATA TATATCACCC 
    ATGTCTTTTG TTATTGGTCT GTTCTTTTAA TATTGTCTAA TATGCGGCGG 
    ACAAAACTGA TATGATTTTC TCTGATTCTT TCTCTTTTCA TTAAATTTCA 
    CNGTAATACA ATCAAAAATT GTTAGGTAAA GCTATATAAA TGTATTATTT 
    AACAAACCAA AAAGCTAAAA AGGAGGTAAG AATAATAATA ATTNTATACA 
    GGGTATAAAA ACATTTATCT CAATCGCATA TTAAAATATC TACATACAAA 
    ACTTTGTAAG TATGGGTCGA TATATGACCA TGTATACACA GAATCAACAG 
    ACAATAATTC ATGTGATGTA CTACTATTCG AAATTTAAAT GTTGACCTGC 
    ACATTCAAAC TTTGGAACTC TAAAAAAATC TGATTTCATT ATATTTAAGC 
    AAAGCAATTA TCGTGTGTCG GTAATTACTG CTAAGTACTT GTACTTGATA 
    TCATATAATG TTTGGTTTCG AGTTTAGGAT ATAATTAATT ATTCGAAATG 
    ACTCTTTCTC GTTTCCTTCT TGCTTCTCGT TTCACATGGC TCCGCCTAAT 
    CCAGCCAGCT CTTTTTTCTC TACAATAATT AGACTAAATC GTTTTCTTAC 
    AATTACAAAT TTAATAAGAT ACGCATGCAT CCGCGGAAGG AATCATTTCA 
    TTTTTCTATT ACAAAAATAT TGACCGCAG

AT5G57330.1

Model type
Protein coding
Short Description
Galactose mutarotase-like superfamily protein
Computational Description
Galactose mutarotase-like superfamily protein; FUNCTIONS IN: isomerase activity, carbohydrate binding, aldose 1-epimerase activity, catalytic activity; INVOLVED IN: galactose metabolic process, carbohydrate metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Glycoside hydrolase-type carbohydrate-binding (InterPro:IPR011013), Aldose 1-epimerase (InterPro:IPR008183), Glycoside hydrolase-type carbohydrate-binding, subgroup (InterPro:IPR014718); BEST Arabidopsis thaliana protein match is: Galactose mutarotase-like superfamily protein (TAIR:AT3G61610.1); Has 1923 Blast hits to 1920 proteins in 763 species: Archae - 0; Bacteria - 1269; Metazoa - 39; Fungi - 135; Plants - 272; Viruses - 0; Other Eukaryotes - 208 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT5G57340.1

Model type
Protein coding
Computational Description
unknown protein; Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Link
InterPro Scan - TAIR