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52-0833-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 2; Position: 17234574 [Map]; Strand: w
      • AT2G41360.1 - [+] show detail - Galactose oxidase/kelch repeat superfamily protein
        Distance: 0; Region: exon1 (CDS)
    Flanking Genome Sequence: 52-0833-1 - 5-prime edge 
    CTTGTGCGTA CCCCTGAGCT CTACCGGATG CGATCCCTCC TCCACAAGGA 
    TTCCATCTAC GTCTGCTTCT GCGATAGGGA GAATTATTCG ACTGATGCCA 
    CCTATCTCTG ATTCTCCACT ANGGTCGGGA AACNAGNTCG GGACTATGAC 
    NCTACTCT

  • 3 prime edge [+] show sequence

    1. Chromosome: 2; Position: 17234458 [Map]; Strand: w
      • AT2G41360.1 - [+] show detail - Galactose oxidase/kelch repeat superfamily protein
        Distance: 0; Region: exon1 (CDS)
    Flanking Genome Sequence: 52-0833-1 - 3-prime edge 
    CGCACAAGGG ACCTGAGCCT TACGGAGACG CAAGAGATGT TTTCGTAGTA 
    GCGTCTCGGG ACGCGGGCTA GGCAGTTCAG AACCATCTCG TCGGGCAAAC 
    AAGAAAGGGA TGACCACGAC GATACGTTTC TAGCCATTGA TCAAACGTCT 
    TTTCAGATTG TCTCTTTGAC TATATAAGTT AGAGAAACTA AACAGCCGTG 
    CAAGGGGCAG GTCTGCGCAG GGTTAATAAT ACCTAATTTT ATAAGAAATA 
    CAGTTTTGGA TCTAGTTCTA ATAGAATTGG AAGTAATTAG TTGCAAATTT 
    AAGGAAACTT TCATATTTGT AGTTTTATTT TCTTAGGCCA CTTATGGCAA 
    GAGAGACGCT TACACACGAA CGGAACAGAT CTCGCAAGAG AGACCTGAAA 
    AAGGCATACG CAACAAGGTT ACAACAAGTG TTTAGGACAG CTCTGTATGG 
    AGTAACTTAC TTTCAAGCT

AT2G41360.1

Model type
Protein coding
Short Description
Galactose oxidase/kelch repeat superfamily protein
Computational Description
Galactose oxidase/kelch repeat superfamily protein; CONTAINS InterPro DOMAIN/s: F-box domain, cyclin-like (InterPro:IPR001810), Galactose oxidase/kelch, beta-propeller (InterPro:IPR011043), Kelch-type beta propeller (InterPro:IPR015915); BEST Arabidopsis thaliana protein match is: Galactose oxidase/kelch repeat superfamily protein (TAIR:AT2G44630.1); Has 607 Blast hits to 599 proteins in 16 species: Archae - 0; Bacteria - 0; Metazoa - 4; Fungi - 0; Plants - 603; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Link
InterPro Scan - TAIR