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52-0838-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 5; Position: 8150112 [Map]; Strand: w
      • AT5G24100.1 - [+] show detail - Leucine-rich repeat protein kinase family protein
        Distance: 0; Region: exon2 (CDS)
    Flanking Genome Sequence: 52-0838-1 - 5-prime edge 
    GTGAAAAGGC AGAGGAAGTC AGAGACAGAA CCAAAACCAG ATAAGTTGAA 
    ACTAGCTAAG AAGATGCCAA GTGAGAAGGA AGTTTCTAAA TTAGGAAAAG 
    AGAAGAATAT TGAAGACATG GAGGATAAGA GCGAAATTAA CAAAGTAATG 
    TTCTTTGAAG GAAGTAATCT GGCTTTTAAC TTGGAAGACT TGTTGATAGC 
    TTCTGCAGAG TTTCTAGGGA AGGGCGTTTT TGGGATGACG TATAAGGCGG 
    TTCTAGAAGA TTCCAAGGTT ATCGCTGTTA AGCGGTTGAA AGACATAGTA 
    GTGTCCCGGA AGGATTTTAA ACATCAAATG GAGATTGTAG GAAACATTAA 
    GCACGAGAAC GTTGCTCCCT TAAGAGCTTA CGTGTGTTCC AAGGAAGAAA 
    AGCT

  • 3 prime edge [+] show sequence

    1. Chromosome: 5; Position: 8149996 [Map]; Strand: w
      • AT5G24100.1 - [+] show detail - Leucine-rich repeat protein kinase family protein
        Distance: 0; Region: exon2 (CDS)
    Flanking Genome Sequence: 52-0838-1 - 3-prime edge 
    CTTTTCACAT AGCAAACGAT TATCACAACC GCGATTACAA AGAATATCAC 
    GAAGCAAACG CTAATCGCTA TCCCGAGAAT CGCGGGTTCA GAGATATAGA 
    TGCCGTTTTT CTTTTGCTCT TTGAATGAAA CTACCGCCGG AGGAGGGGCA 
    TTTTCGAAGA CTAAGTTGTT GCCGGAAAAA GCCGAGTTCC CGAATCTTTT 
    CAGAGAATTT GGGATTGATC CGGTGAGATT GTTGTTGGAA AAGTTAAGTC 
    TGCGTAGACC GGGGAGATTA AGATCTGGAA TCTCACCGGA GAATGAGTTT 
    TTAGCTAGGT TAAGCGAGAC GAGTCCGGTA AGATTAGCAA ATCCCGCGGG 
    AATACTACCG TTAAACCGGT TACTGTACAG ATCAAGAACA GTGAGATTCG 
    TCCACGTGGC GTAATCGGAT GGTAATGGGC CAGAGAATCT GTTGTTCCCG 
    AGACTAATTG CTTTGAGTTT CTTAAGCTGC AAGAAATCAA TTGGGAACGG 
    CCCTCGTAGG CCGTTGGATC GAAGACTGAG GATCTGAAGC TCCGATAGAC 
    GGCTGATAGT ACCAGGTGGG ATCACTCCTA GAAGACTTGC TCCGGGCAAG 
    TGAAGGGCAG TGACACGTGT GCCGTCTATG TCGCATGTGA CCCCTGGCCA 
    CGTGGTGCAT ACCGGGCTGC TTGTGTTCCA CGCTAGAGAC CGTGGGTGAA 
    TGATGTTGTT GAGGAAATCG AGAAGGCTTG TCTGTCAC

AT5G24100.1

Model type
Protein coding
Short Description
Leucine-rich repeat protein kinase family protein
Computational Description
Leucine-rich repeat protein kinase family protein; FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, ATP binding; INVOLVED IN: transmembrane receptor protein tyrosine kinase signaling pathway, protein amino acid phosphorylation; LOCATED IN: endomembrane system; EXPRESSED IN: root; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Leucine-rich repeat-containing N-terminal domain, type 2 (InterPro:IPR013210), Leucine-rich repeat (InterPro:IPR001611), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Protein kinase-like domain (InterPro:IPR011009); BEST Arabidopsis thaliana protein match is: Leucine-rich repeat protein kinase family protein (TAIR:AT5G53320.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
Link
InterPro Scan - TAIR