1. Home
  2. Mutant Lines
  3. 52-0862-1

52-0862-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 2; Position: 5666669 [Map]; Strand: w
      • AT2G13580.1 - [+] show detail - pseudogene, similar to OSJNBa0072K14.8, blastp match of 34% identity and 3.7...
        Distance: 6906; Region: intergenic
      • AT2G13590.1 - [+] show detail - pseudogene, hypothetical protein, similar to GB:AAA75253
        Distance: 409; Region: intergenic
    Flanking Genome Sequence: 52-0862-1 - 5-prime edge 
    GTNNNAAACT AACAAAATCG GTTATACGAT AACGGTCGGT ACGGGATTTT 
    CCCATCCTAC TAGGGACTAA ATTGTGACCA TAACAAAAGT CGTATATTAA 
    TGACTTTTTA GTGACAAACT ACAATTTTTT TTTTTTTTTT TNAAAAAAGG 
    GGGNCTTTTT NAAANAANNG GGGNGGAAAA ANTCCCNCCN GGGGNAACCC 
    NCCNNAAAAN CAAANCNANN GNTTAAANNN NAANGGGNTT AAAAANGGGG 
    NCTTTAAANN GGGGGNAAAN CCCNTTTNAA NANNCCCNAA AANNGGGNNN 
    NNCNGNAANC CNTNNNTTTT NNNGNNGNAA ANTTNNAAAA AAAANNNCNG 
    GCNCNAAANT TNGGGGNNNN CNNNCCCNAA AAAAANNGGG GGGNCCCCCC 
    CANTTTTTAA NCCCCCTNAN NTNNNTTNNN GGGNNGGNGG NACCCCCCCA 
    AAAAGGGGGG NNNAAAANTT TNGNNGGGGG GNCCCCNTTT TTTGGGGGGN 
    TAAAAAANCC CNNNTTNTTT AACCCNAAAA ANTTTNNGNT NGGGGNTTTT 
    TTNAAAAANC NTTTTNNNNC CNNTNGGGGG AGNTTTTTTT NGGGGGNCCT 
    TTTTTTANGG GGGCNNGNAA AATTCCCCNT TTAAACCNTT TTTGGGGGAT 
    TCCCNCNCCC CCNTTTTTTN GGAAACCCTG GAGGGGCCCC CCTTNCCCGT 
    TANGGGAAAA CCTGGAAANT NGGCCCTTTT TTGGGGGNCT GNATTCCCCC 
    CCCGGGCCNN NC

  • 3 prime edge [+] show sequence

    1. Chromosome: 2; Position: 5666606 [Map]; Strand: w
      • AT2G13580.1 - [+] show detail - pseudogene, similar to OSJNBa0072K14.8, blastp match of 34% identity and 3.7...
        Distance: 6843; Region: intergenic
      • AT2G13590.1 - [+] show detail - pseudogene, hypothetical protein, similar to GB:AAA75253
        Distance: 472; Region: intergenic
    Flanking Genome Sequence: 52-0862-1 - 3-prime edge 
    ANTATACAAC TATTAAAATC GTGTTGGTAA ACCGTCGCTG ATATAGGATC 
    ACATAAATTA GTACACAAAG GGGTCACAAA TAACCATCGT TCTTGTGACC 
    ATTTTATTTT GCGAACGTTT TTTAGCGACT AATTGAGATA GTTCCAAAGT 
    TGTCGTAAAT AGCGATTTGG GACCATTTTA GGACTTTTTT GGGGGTCTCA 
    AAAAGCATGT TTTCTTGTAG TATCGGTTTG GCTATATAAG GAGGAGCTAG 
    GAAGTTTTGG AAANGAGGAG AGCTGAGGCN TANAGATATA TTATTGAGAG 
    CTTTCTANGG GTGTGTGTNA CATACTTTTA CCACATAATT TCGCGGTTTT 
    GTGCGACGAN TTTCACGGGT TTGGTGCTTA NGTGATGAAN CCNGTCTGGT 
    GATGTGTGA

AT2G13580.1

Model type
Pseudogene
Computational Description
pseudogene, similar to OSJNBa0072K14.8, blastp match of 34% identity and 3.7e-06 P-value to GP|21740743|emb|CAD40552.1||AL606621 OSJNBa0072K14.8 {Oryza sativa (japonica cultivar-group)}
Link
InterPro Scan - TAIR

AT2G13590.1

Model type
Pseudogene
Computational Description
pseudogene, hypothetical protein, similar to GB:AAA75253
Link
InterPro Scan - TAIR