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52-0889-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 2; Position: 14220256 [Map]; Strand: c
      • AT2G33580.1 - [+] show detail - Protein kinase superfamily protein
        Distance: 0; Region: exon1 (CDS)
    Flanking Genome Sequence: 52-0889-1 - 5-prime edge 
    GTTGCGAGGA TTCTTGATGA AGGTGATCTT GATCTTCAGT TAACAAGACA 
    TGTTGAAGGA ACACAAGGCT ACTTAAGNCT CCAGAGTATG TGGAGAATGG 
    AGTCATTACT TCGAAACTAG ACGTGTTTGC TTTTGGAGTT GCNGGTTCTT 
    GAGCTTCTTT CGGGGAGAGA AGCCGTTCCG ATNCCTTAAG AAANAAGGAA 
    GGNNAAAAAA AAGTGGGNAA TGTTGGGTAA AGNGANNAAC AATGNGCTTT 
    GAAGGAAAAA ATGGGAAAAA AAAATTAAAA NAATTTTTGG GTTACCAANC 
    CCGGGCCGGG AACNCCCNGG CCCTTTAAA

  • 3 prime edge [+] show sequence

    1. Chromosome: 2; Position: 14220372 [Map]; Strand: c
      • AT2G33580.1 - [+] show detail - Protein kinase superfamily protein
        Distance: 0; Region: exon1 (CDS)
    Flanking Genome Sequence: 52-0889-1 - 3-prime edge 
    CTCGCAACAC CGAAATTCGC AATCTTGGCT CTGAAATTAG AATCCAGAAG 
    TATGCTTGTT GATTCCAAGT TCTTATGAAT ATGAGGTGGA GTTATATAGT 
    TATGGAGATA ATCTAACGCC TCTGCCACAT CCCTTGCTAT TTCAACTCTC 
    TGTTTCCATG TCAAACTCTT CTTGCCCGAC GAGTGAAGCC AATCACTGAT 
    CGATCCATTC TCTGAATACT CGAAGACGAG GTACGATGTT CCTTCACGGA 
    TACAGAAACC TGAGAGACGG ATGATATTAG AATGATTTAG CTTCTTCAAA 
    AGATTGATCT CAGAGGAAGA AACATCTCCT TTGATCACTT TCACAGCGGC 
    ATCGTCGCCG TTGATTGTCG CGCGATAAAC AGAGCCTTTG ATTCTGTTTT 
    CGTCGCTGAA ATTCGAAGTA GCTGATTGAA GATCGTTGAA TCTGTATAGT 
    GTTAGAGATT CTATGGCGGA TTTTAAACCG AAAGCT

AT2G33580.1

Model type
Protein coding
Short Description
Protein kinase superfamily protein
Computational Description
Protein kinase superfamily protein; FUNCTIONS IN: kinase activity; INVOLVED IN: protein amino acid phosphorylation, cell wall macromolecule catabolic process; LOCATED IN: plasma membrane; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Peptidoglycan-binding lysin domain (InterPro:IPR018392), Protein kinase, catalytic domain (InterPro:IPR000719), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009); BEST Arabidopsis thaliana protein match is: protein kinase family protein / peptidoglycan-binding LysM domain-containing protein (TAIR:AT2G23770.1); Has 102109 Blast hits to 101070 proteins in 4036 species: Archae - 73; Bacteria - 10993; Metazoa - 38718; Fungi - 7726; Plants - 30221; Viruses - 349; Other Eukaryotes - 14029 (source: NCBI BLink).
Link
InterPro Scan - TAIR