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52-1021-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 1; Position: 22102551 [Map]; Strand: c
      • AT1G60020.1 - [+] show detail - transposable element gene
        Distance: 0; Region: exon1 (NonCoding)
    Flanking Genome Sequence: 52-1021-1 - 5-prime edge 
    TTCATGAAGA TGACTCTCAA ATGGGCTCTG GCCCAAATTC AGTTTCATCT 
    CCACAAGGCC CAATTCCGCC AAACACCAAC TCAAAAAGCC CATCTGAAAA 
    CACTTCCAGC CCATCACACT CAAACCAGCC CAATAACACA CCACCTAGCT 
    CCCCATCGTC TTCTTCTTCC GTCCCGACTC CAATTCCCTC TCCATCACCA 
    CAGTCATCAA ATTCCCCACC CCCACCCATA CAAAATCAAC ATTCCATGCG 
    AACCCGAGCC AAAAACAACA TATCCAAACC AATAAAAAAA CTAACCCTAG 
    CCGCCTCTCT CAAAGCTAAA TCCAAAATTC CATCCACAGT GGCTGAAGCT 
    CTTCGTGATC CAAACTGGCG AAACGCGATG TCAGAGGAAT TTAATGCGGT 
    TCTCNGGAAT GGCACCTATG AGCTGGTCCC GCCAGAACCA CACCAAAATG 
    TTGTTGGTAC TCGTTGGATT TTTACAATCA AATATAACCC TGATGGCTCT 
    ATTGACAGGT ACAAAGCACG GTTTGTTGCC AAGGGGTTTC ATCAACAACA 
    CGGCTTTGAC TACTCAGACA CATTCAGTCC CGTCGTTAAA TCCACCACAG 
    TTCGAACTGT TTTCGACATT GCGGTCAGTT GCTCTTGGGA TATACGACAG 
    CTCGATATCA ACAACGCTTT TTTGCAAGGC CGCCTAACAN

AT1G60020.1

Model type
Transposable element gene
Short Description
transposable element gene
Computational Description
copia-like retrotransposon family, has a 0. P-value blast match to GB:AAC02672 polyprotein (Ty1_Copia-element) (Arabidopsis arenosa)
Link
InterPro Scan - TAIR