1. Home
  2. Mutant Lines
  3. 52-1042-1

52-1042-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 3; Position: 1222018 [Map]; Strand: c
      • AT3G04530.1 - [+] show detail - phosphoenolpyruvate carboxylase kinase 2
        Distance: 0; Region: exon1 (CDS)
    Flanking Genome Sequence: 52-1042-1 - 5-prime edge 
    CCTCCGGCGC CACGTAATAC GGTGTTCCCA CAACTCCCTC CGCCGTTTCT 
    CCGCCTAACC ACACCGCTGA TCCGAAATCA CAGAGCTTAA CACCGCCGCT 
    TACGAGATCG ACTAAGACGT TGTCAGGTTT CACATCCCGA TGAACGACGT 
    CGCACCGGTG ACAATGAGCA AGCGCACTGA GGATCTGTTT CGCGTATGAG 
    GCGGATTCTG ATTCTGATAA CCTCCCCCCG GCGGAGATTA ACCGATCGTA 
    AATCGTCATC GGCGGATCGA CTAATTCCAT GACGATCGCA AGAGAATCCT 
    CTGTTTCGTA GAGATCGAAG ATCCTGATGA TATTCGGATG CGGCGGTAAC 
    ATCGCCATGA TCCTCGGCTC CGTCTCTATA CACTCGCGAT CTAACGCGTC 
    GATGAGCACG CGCTTGTCAA TGGTTTTGCA GGCGTAGAAT T

  • 3 prime edge [+] show sequence

    1. Chromosome: 3; Position: 1222134 [Map]; Strand: c
      • AT3G04530.1 - [+] show detail - phosphoenolpyruvate carboxylase kinase 2
        Distance: 0; Region: exon1 (CDS)
    Flanking Genome Sequence: 52-1042-1 - 3-prime edge 
    GCCGGAGGTA GTGATGGGGA GGAAGTACGA CGAGAAGGTT GATATATGGA 
    GCGCTGGTGT AGTGATATAC ACGATGCTAG CTGGAGAACC GCCGTTTAAC 
    GGTGAGACGG CGGAAGATAT ATTTGAATCG ATATTGAGAG GGAATTTGAG 
    GTTTCCGCCG AAGAAGTTTG GGTCTGTATC ATCGGAAGCG AAGGATTTGT 
    TGAGGAAAAT GATATGTCGC GATGTTTCTC GACGATTTTC TGCAGAGGAT 
    GCTCTTCGTA AGTCATCTTT TTTTTCTCGT TTTTTTTTTT TTTTTGNGGN 
    NGCCCCTTTN TTTNNNNGGG GGAATTCCCG GACCTTTTTG NGTTTAAAAC 
    CCTTGGAACC CCCCAAANNN TTTTTTNAAA TTTTCCCCCC GGGGGGNNAA 
    CNCCCGGNNN TTTTTA

AT3G04530.1

Model type
Protein coding
Short Description
phosphoenolpyruvate carboxylase kinase 2
Curator Summary
Encodes a second Arabidopsis phosphoenolpyruvate carboxylase kinase gene product with a different expression pattern from PPCK1. Expression of the gene is upregulated by exposure of the plant to light.
Computational Description
phosphoenolpyruvate carboxylase kinase 2 (PPCK2); CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Serine/threonine-protein kinase domain (InterPro:IPR002290), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase, catalytic domain (InterPro:IPR000719), Calcium-dependent protein kinase (InterPro:IPR020642), Calcium/calmodulin-dependent protein kinase-like (InterPro:IPR020636), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635); BEST Arabidopsis thaliana protein match is: phosphoenolpyruvate carboxylase kinase 1 (TAIR:AT1G08650.1); Has 120539 Blast hits to 118552 proteins in 3545 species: Archae - 165; Bacteria - 14785; Metazoa - 43114; Fungi - 13204; Plants - 27915; Viruses - 518; Other Eukaryotes - 20838 (source: NCBI BLink).
Link
InterPro Scan - TAIR