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Mutant Lines
52-1043-1

52-1043-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

5 prime edge [+] show sequence

Chromosome: 1; Position: 1240328 [Map]; Strand: w
- AT1G04550.1 - [+] show detail - AUX/IAA transcriptional regulator family protein
  Distance: -47; Region: promoter
- AT1G04550.2 - [+] show detail - AUX/IAA transcriptional regulator family protein
  Distance: -47; Region: promoter

GTCGGAAGAC AAGTTTTGAG AGAAAACAAA CAATATTTTA TAACAAAGGA 
GAAGACTTTT GGTTAGGAAA AATTGGTATG GCCATTACAA GACATATGGG 
TCCCAATTCT CATCACTCTC TCCACCACCA AAATCCTCCT CTCTCTCTCT 
CTCTCTCTCT CTCTTTNACT NTGTNTANAT CATCTCTNTC TCTCGTCTCT 
CTCANACCCT ANACACACTC TTTTTNTTNN TGGNGTCTNC ANTCTCTGTG 
TGTNATNANG CTNCCANCCN GGGGCGTNGA NCACGCGCGN CGNCTATATT 
ATATTTTCNN GAGAAGCTNN GGGAAAAAAG NCCCNTCACA NACTACAAAA 
TCTATANTGN ATT

3 prime edge [+] show sequence

Chromosome: 1; Position: 1240212 [Map]; Strand: w
- AT1G04550.1 - [+] show detail - AUX/IAA transcriptional regulator family protein
  Distance: -163; Region: promoter
- AT1G04550.2 - [+] show detail - AUX/IAA transcriptional regulator family protein
  Distance: -163; Region: promoter

CTTCCGACAT AATCAAACCT GTTGTGCTCT CGTTGGGATA TCGTTGTTGT 
GTTTGGTTCA AGCAGCAAGA GAAAATAGAG AGTCCCAAGA AACTTGTTTA 
CAGTTGTATG TGTGTGTGCA AGGTTTTGCT TTGTGTTGCC TGTTGCATCA 
TAATATAGTT TTTTTTTGTT TTCTTTTCCG CTTGTGGTTT TTTTCTTTTC 
TTAACCAAAA ATTGTATTGC TTTANCCTTT AGGATGAANA GTCTCTGTTT 
TAAATACCAT TTTTCTTTAA TTTGGGCTAA TCAAAAAATC TAAATTAACT 
TTTATATTTC ATATACTATG TATNGGTTAC ATTGCTCCTA NATTTTANAC 
CTAATTTTAG TCTCTCTTTA ACAGGTTGGC CATCATTCTT TATACTAGCA 
AACTCGTTTA TGGTCATATG CCATTTGCAT ATTGACCATT NGATTATCTT 
TCTTTTCTAA TAACTAANAT AATATATATT TTCAACTTTT TCCTTAAACC 
ATGATTGTTG TCGAACAAGA NTATAAAAGA AAGTGAGGGA AAAAAAATGG 
TGGGAAAAGA TGCATTATTA TAAAATCGNG GTGATGAGAT ATTCATCATT 
ATGTTNGATG ATCCTTTGAA AACTTTTGCA GGCGCAATTG GTTTGNGGAA 
ATTACACTTT TGATCAAAAT CATTATCAAG GAGTNCATAN ATTTCATGCT 
CTAATTGATG GATTTGATAG AAAATAAACT AAATAAC

AT1G04550.1

Model type: Protein coding
Short Description: AUX/IAA transcriptional regulator family protein
Curator Summary: IAA12/BDL plays a role in auxin-mediated processes of apical-basal patterning in the embryo. bdl mutants lack a primary root meristem
Computational Description: indole-3-acetic acid inducible 12 (IAA12); FUNCTIONS IN: transcription repressor activity, sequence-specific DNA binding transcription factor activity; INVOLVED IN: xylem and phloem pattern formation, response to auxin stimulus, embryonic pattern specification, root development; LOCATED IN: nucleus; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Aux/IAA-ARF-dimerisation (InterPro:IPR011525), AUX/IAA protein (InterPro:IPR003311); BEST Arabidopsis thaliana protein match is: auxin-induced protein 13 (TAIR:AT2G33310.3); Has 1087 Blast hits to 1087 proteins in 52 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 1087; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Link: InterPro Scan - TAIR

AT1G04550.2

Model type: Protein coding
Short Description: AUX/IAA transcriptional regulator family protein
Curator Summary: IAA12/BDL plays a role in auxin-mediated processes of apical-basal patterning in the embryo. bdl mutants lack a primary root meristem
Computational Description: indole-3-acetic acid inducible 12 (IAA12); FUNCTIONS IN: transcription repressor activity, sequence-specific DNA binding transcription factor activity; INVOLVED IN: xylem and phloem pattern formation, response to auxin stimulus, embryonic pattern specification, root development; LOCATED IN: nucleus; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Aux/IAA-ARF-dimerisation (InterPro:IPR011525), AUX/IAA protein (InterPro:IPR003311); BEST Arabidopsis thaliana protein match is: auxin-induced protein 13 (TAIR:AT2G33310.3); Has 2001 Blast hits to 2000 proteins in 81 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 2000; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink).
Link: InterPro Scan - TAIR