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Mutant Lines
52-1079-1

52-1079-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

Notice

More than one insertion position or no insertion point is expected.

5 prime edge [+] show sequence

Chromosome: 3; Position: 7022475 [Map]; Strand: w
- AT3G20110.1 - [+] show detail - cytochrome P450, family 705, subfamily A, polypeptide 20
  Distance: 0; Region: intron1 (CDS)
- AT3G20120.2 - [+] show detail - cytochrome P450, family 705, subfamily A, polypeptide 21
  Distance: -836; Region: promoter
- AT3G20120.1 - [+] show detail - cytochrome P450, family 705, subfamily A, polypeptide 21
  Distance: -894; Region: promoter

GTAATCAAAA TTTCTTCTCA TTAAGTGTGG ATTCATTAAG AATGGGGAAA 
AACAAATTCT GACTAAGAAA CGTTTGAAAC TTGCAGGAGC TTTTCCTTGG 
AGGCACTGAT ACCTCGGCGC AAACAATACA GTGGACAATG GCCGAGCTCA 
TCAACAACCG TAACGTTCTT AAGAGATTGA GAGAAGAAAT TGATTCGGTT 
GTAGGAGAAA CAAGGTTGAT TCAAGAAAAG GATCTACCAA AGCTACCTTA 
TTTGCAATCT GTAGTCAAAG AAGGGCTAAG ACTGCACCCG CCATTGCCTC 
TCATGGTAAG GACGTTCCAA AGAAGTTGTG AGATGAAAGG GTTCTACATA 
GCGGAGAAGA CAACACTTGT AGTTAATGCT TATGCTGTGA TGAGAGATCC 
TACTACTTGG GAAGATCCTG ATGAGTTTAA GCCAGAGAGG TTTCTAAGGC 
AAGAGGAGGA GAGAAGAGCA CTGAAGCACA TTGCTTTTGG AAGTGGAAGG 
AGAGGCTGTC CAGGATCAAA CCTAGCTACT ATTTTCATAG GAACTGCAAT 
TGGAACAATG GTGCAGTGTT TTGACTTGAG CATCAAAGGA GACAAGGTCA 
AAATGGATGA GGCTGGAGGA CTCAACTTGA CCATGGCTCA TNCCCTTGAG 
TGCATTCTTG TTNCTCGACC CCACCTTTCA TTTCTAACCA GCAGATTCCA 
AGTTTGTAAT TTCCT

3 prime edge [+] show sequence

Chromosome: 1; Position: 25369888 [Map]; Strand: w
- AT1G67690.1 - [+] show detail - Zincin-like metalloproteases family protein
  Distance: 0; Region: exon4 (CDS)

NNAAATGAAA ACGGTAGAGG TATTTTACCG ACCGTTACCG ACCGTTTTCA 
TCCCACGAAC AACGACTTGA TATGGTTCCT AGTGATCTTA TGCTCTGCTT 
TTTCGTCTTC ATAAGCTNCC AGNCCGGGCC GTAAGANCAC GCNNGCNCTA 
TNGAGTNGAA TATGACTTCG AACGNNACGA GTACGATNGA GTNTAAGANC 
TTGAANCGNN ACCNGATCTN ATANGCCTAN NTNGCGTTTA NTTGTTNTAA 
GACACNAAGN CAAAGANTAA NATGGNCNGG GGNTACNNCA TGAAGNCNAC 
CACNGCGGGN CGTNAGACNA NAGGTGNCCT ATATNNCCAA TTCGNCCAAC 
GGCAATACAA CANNCNNANA AGAGAGCTAC AAAAGNATNA ACAACAATAG 
AATCAAGTCA GAGATAATTT TNCTTTACCA TATCTGGTTN TTCTCAGCTT 
AGTTNTCAAA TACCTTATCT AGAGAAACCA AAGCNACAGC ATNATGAACT 
CGNGTAGACT TGNGAATAAT NNCTTCAGCT AAATNGAGAA TCTNCTTCGC 
AGATAGGNNC ACACNAACAG NNTNACAACC AGGAAGACCT NNATNNCCAA 
TGAATACGAA CATTGNGAAA TNGAATN

AT1G67690.1

Model type: Protein coding
Short Description: Zincin-like metalloproteases family protein
Computational Description: Zincin-like metalloproteases family protein; FUNCTIONS IN: metalloendopeptidase activity; INVOLVED IN: proteolysis; LOCATED IN: cellular_component unknown; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Peptidase M3A/M3B, thimet/oligopeptidase F (InterPro:IPR001567); BEST Arabidopsis thaliana protein match is: Zincin-like metalloproteases family protein (TAIR:AT5G51540.1); Has 5194 Blast hits to 5176 proteins in 1382 species: Archae - 6; Bacteria - 3154; Metazoa - 337; Fungi - 406; Plants - 147; Viruses - 0; Other Eukaryotes - 1144 (source: NCBI BLink).
Link: InterPro Scan - TAIR

AT3G20110.1

Model type: Protein coding
Short Description: cytochrome P450, family 705, subfamily A, polypeptide 20
Curator Summary: member of CYP705A
Computational Description: "cytochrome P450, family 705, subfamily A, polypeptide 20" (CYP705A20); FUNCTIONS IN: electron carrier activity, monooxygenase activity, iron ion binding, oxygen binding, heme binding; INVOLVED IN: oxidation reduction; LOCATED IN: endomembrane system; EXPRESSED IN: hypocotyl, root; CONTAINS InterPro DOMAIN/s: Cytochrome P450 (InterPro:IPR001128), Cytochrome P450, E-class, group I (InterPro:IPR002401), Cytochrome P450, conserved site (InterPro:IPR017972); BEST Arabidopsis thaliana protein match is: cytochrome P450, family 705, subfamily A, polypeptide 19 (TAIR:AT3G20100.1); Has 35155 Blast hits to 34985 proteins in 1775 species: Archae - 57; Bacteria - 5353; Metazoa - 11481; Fungi - 7177; Plants - 9434; Viruses - 6; Other Eukaryotes - 1647 (source: NCBI BLink).
Link: InterPro Scan - TAIR

AT3G20120.1

Model type: Protein coding
Short Description: cytochrome P450, family 705, subfamily A, polypeptide 21
Curator Summary: member of CYP705A
Computational Description: "cytochrome P450, family 705, subfamily A, polypeptide 21" (CYP705A21); FUNCTIONS IN: electron carrier activity, monooxygenase activity, iron ion binding, oxygen binding, heme binding; INVOLVED IN: oxidation reduction; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: Cytochrome P450 (InterPro:IPR001128), Cytochrome P450, E-class, group I (InterPro:IPR002401), Cytochrome P450, conserved site (InterPro:IPR017972); BEST Arabidopsis thaliana protein match is: cytochrome P450, family 705, subfamily A, polypeptide 20 (TAIR:AT3G20110.1); Has 32337 Blast hits to 32253 proteins in 1630 species: Archae - 50; Bacteria - 3458; Metazoa - 11535; Fungi - 7214; Plants - 8855; Viruses - 3; Other Eukaryotes - 1222 (source: NCBI BLink).
Link: InterPro Scan - TAIR

AT3G20120.2

Model type: Protein coding
Short Description: cytochrome P450, family 705, subfamily A, polypeptide 21
Curator Summary: member of CYP705A
Computational Description: "cytochrome P450, family 705, subfamily A, polypeptide 21" (CYP705A21); FUNCTIONS IN: electron carrier activity, monooxygenase activity, iron ion binding, oxygen binding, heme binding; INVOLVED IN: oxidation reduction; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: Cytochrome P450 (InterPro:IPR001128), Cytochrome P450, E-class, group I (InterPro:IPR002401), Cytochrome P450, conserved site (InterPro:IPR017972); BEST Arabidopsis thaliana protein match is: cytochrome P450, family 705, subfamily A, polypeptide 20 (TAIR:AT3G20110.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).
Link: InterPro Scan - TAIR