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Mutant Lines
52-1081-1

52-1081-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

5 prime edge [+] show sequence
1. Chromosome: 5; Position: 7810071 [Map]; Strand: w
  - AT5G23210.1 - [+] show detail - serine carboxypeptidase-like 34
    Distance: -612; Region: promoter
  - AT5G23210.3 - [+] show detail - serine carboxypeptidase-like 34
    Distance: -784; Region: promoter
Flanking Genome Sequence: 52-1081-1 - 5-prime edge
```
CTTTGAAAAA CTAACAAAAT CGGTTATACG ATAACGGTCG GTACGGGATT 
TTCCCATCCT ACTTTCATCC TCTATGAAAT GAACCGTCAC TTTCTTTGCT 
CTGCTCTGCT TTTTATTTGG ATC
```

3 prime edge [+] show sequence

Chromosome: 5; Position: 7810061 [Map]; Strand: w
- AT5G23210.1 - [+] show detail - serine carboxypeptidase-like 34
  Distance: -622; Region: promoter
- AT5G23210.3 - [+] show detail - serine carboxypeptidase-like 34
  Distance: -794; Region: promoter

ATGAAAACGG TAGAGGTATT TTACCGACCG TTACCGACCG TTTTCATCCC 
TCTTAAGAGA GATTTGACCA AACACTGTTT TACTTCTCTC TCTCTCAATC 
TTTCATGTTC CTCCCCCTTG AAATTAGCAA CGACCGATCT ACATAAATAT 
TTTTATATAA TATAATGTGT GAATTGTGAT GTATGTGCAA AGTAAATTAT 
ACCTGTCATA TAACAAAACA GAATGTTACG GCTTTGATTG CGTAATAAAA 
AGATTCAGTT TCTGTTTATA TACGTCATAG AAGTGTATAT CTACATCTAC 
ATGTACTCTC CTATTATACC TATATACATT AAGAAGTCAC GAGGCATTTA 
TGTTACAGTG TGATCAATAT GAAATGTCTA CCAACAAAAA ACTTATAAAA 
TTTTTTGTTT GCATTATTAT ATGACTAACG TGTTTTAAAA GAAACTAGCT 
AAGATTCTCT ACGAAGATCA TAAACATGTA AACATTTACT CTCTTTTTTT 
TCAATTACTA TGTCTTTTTT TTTGCGTANA TAATTATTAC ATGTTTAAGT 
TATCAAATAG TTCAAGAGTG AGTTTAAACA ACATTTGATA TACTCACAAT 
GATTATAGAT AATAGAGTTA TAAGATTATA CAATTATAGT TTTCATATAA 
TCGTTTATGT TGAAGTTGNG CATTTTATGT CTACTTTATT GAATT

AT5G23210.1

Model type: Protein coding
Short Description: serine carboxypeptidase-like 34
Computational Description: serine carboxypeptidase-like 34 (SCPL34); FUNCTIONS IN: serine-type carboxypeptidase activity; INVOLVED IN: proteolysis; LOCATED IN: vacuole, plant-type cell wall; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Peptidase S10, serine carboxypeptidase (InterPro:IPR001563), Peptidase S10, serine carboxypeptidase, active site (InterPro:IPR018202); BEST Arabidopsis thaliana protein match is: serine carboxypeptidase-like 35 (TAIR:AT5G08260.1); Has 3785 Blast hits to 3735 proteins in 437 species: Archae - 0; Bacteria - 325; Metazoa - 634; Fungi - 858; Plants - 1544; Viruses - 0; Other Eukaryotes - 424 (source: NCBI BLink).
Link: InterPro Scan - TAIR

AT5G23210.3

Model type: Protein coding
Short Description: serine carboxypeptidase-like 34
Computational Description: serine carboxypeptidase-like 34 (SCPL34); FUNCTIONS IN: serine-type carboxypeptidase activity; INVOLVED IN: proteolysis; LOCATED IN: plant-type cell wall; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Peptidase S10, serine carboxypeptidase (InterPro:IPR001563), Peptidase S10, serine carboxypeptidase, active site (InterPro:IPR018202); BEST Arabidopsis thaliana protein match is: serine carboxypeptidase-like 35 (TAIR:AT5G08260.1); Has 3778 Blast hits to 3739 proteins in 432 species: Archae - 0; Bacteria - 325; Metazoa - 627; Fungi - 832; Plants - 1505; Viruses - 0; Other Eukaryotes - 489 (source: NCBI BLink).
Link: InterPro Scan - TAIR