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Mutant Lines
52-1141-1

52-1141-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

5 prime edge [+] show sequence

Chromosome: 5; Position: 16688895 [Map]; Strand: c
- AT5G41740.1 - [+] show detail - Disease resistance protein (TIR-NBS-LRR class) family
  Distance: 0; Region: exon1 (CDS)
- AT5G41740.2 - [+] show detail - Disease resistance protein (TIR-NBS-LRR class) family
  Distance: 0; Region: exon1 (CDS)

AAACTAACAA AATCGGTTAT ACGATAACGG TCGGTACGGG ATTTTCCCAT 
CCTACTTTCA TCTGATCATT GAAAGTCGTG ATCCCTTTGC TTGCAAAGAG 
ACTGTGTAAA TGACTGAGAA ACCCTTTACG GACATCTGGA CCGTGGAAGC 
TCGAAAAGAC TTGGGACACA GAAGAAGAAG CCATGAGAGA TCACAAATGC 
NTTGAACGTG AAGAAAGTAG TTTTAGAATG GTATTGAAGA AAGTATGATT 
GGAAAAGCAA ACACGCGTAT GCTTTGAAAG TATGCTTGAA CGTGAAGAAA 
GTATGTTTGG TTTATTTGTT GAAGCAAAAA CGCGTAAAAG GAGAAGAGAA 
ATTTCGAAGA AATTGGAATG TAACTGGAAC TGAAAAAATA CCAAAAGGAG 
AAGAGAAGTT TCGAAGGAAA GTTTTGTTAT AGTCGTCGAG GACCAATGGC 
TATTTTCGTA CAGATTGTCA TTTTCCAGTG AAATGACGTC AGAGTTGAAA 
GTTGGAAGAA GAGGACGAAT TATGAGGGGA TTCTGTTCTC AACCACATAC 
CACAGATTGT AAATTTGGTT TGAAATGTAA ACCGGGTCTT TACTTTGTTT 
TAAATTGCAT AACGATAATA TCGAATTGAC CATTTGAACA TCAAGAACCA 
AACTTTCTTT GCAAAGTTTG CAAACGTTGG AATTTGATAT TTTACTTATT 
CAACAAGAAA CTAAATTCTG CTTTTGGGAA TGATGATTTT GGATGTTTAA 
TTTANGTATG GATCACGATG CTTGAACGTT TTGA

3 prime edge [+] show sequence
1. Chromosome: 5; Position: 16688836 [Map]; Strand: c
  - AT5G41740.1 - [+] show detail - Disease resistance protein (TIR-NBS-LRR class) family
    Distance: 0; Region: exon1 (CDS)
  - AT5G41740.2 - [+] show detail - Disease resistance protein (TIR-NBS-LRR class) family
    Distance: 0; Region: exon1 (CDS)
Flanking Genome Sequence: 52-1141-1 - 3-prime edge
```
AAAACGGTNG AGGTATTTTA CCGACCGTTA CCGACCGTTT TCATCGTTGT 
GCTCTCGAAG AGAGAGGCCA GACGATCGGA CCTAAGCTCA TACAAGGGAT 
TAAAGAAGCT AGAGTCTCGA TCGTTGTGCT CTCGAAGAAG TACGCTTCTT 
CCAGCTGGTG TTTAGATGAA CTTGTGGAAA TCGTGAGATG CAAAGAAGCT
```

AT5G41740.1

Model type: Protein coding
Short Description: Disease resistance protein (TIR-NBS-LRR class) family
Computational Description: Disease resistance protein (TIR-NBS-LRR class) family; FUNCTIONS IN: transmembrane receptor activity, nucleoside-triphosphatase activity, nucleotide binding, ATP binding; INVOLVED IN: signal transduction, apoptosis, defense response, innate immune response; LOCATED IN: intrinsic to membrane, chloroplast; CONTAINS InterPro DOMAIN/s: ATPase, AAA+ type, core (InterPro:IPR003593), NB-ARC (InterPro:IPR002182), Leucine-rich repeat (InterPro:IPR001611), Disease resistance protein (InterPro:IPR000767), Toll-Interleukin receptor (InterPro:IPR000157); BEST Arabidopsis thaliana protein match is: Disease resistance protein (TIR-NBS-LRR class) family (TAIR:AT5G41750.2); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Link: InterPro Scan - TAIR

AT5G41740.2

Model type: Protein coding
Short Description: Disease resistance protein (TIR-NBS-LRR class) family
Computational Description: Disease resistance protein (TIR-NBS-LRR class) family; FUNCTIONS IN: transmembrane receptor activity, nucleoside-triphosphatase activity, nucleotide binding, ATP binding; INVOLVED IN: signal transduction, defense response, apoptosis, innate immune response; LOCATED IN: intrinsic to membrane, chloroplast; CONTAINS InterPro DOMAIN/s: ATPase, AAA+ type, core (InterPro:IPR003593), NB-ARC (InterPro:IPR002182), Leucine-rich repeat (InterPro:IPR001611), Toll-Interleukin receptor (InterPro:IPR000157), Disease resistance protein (InterPro:IPR000767); BEST Arabidopsis thaliana protein match is: Disease resistance protein (TIR-NBS-LRR class) family (TAIR:AT5G41750.2); Has 3146 Blast hits to 2582 proteins in 174 species: Archae - 0; Bacteria - 334; Metazoa - 256; Fungi - 13; Plants - 2498; Viruses - 0; Other Eukaryotes - 45 (source: NCBI BLink).
Link: InterPro Scan - TAIR