Home
Mutant Lines
52-1171-1

52-1171-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

5 prime edge [+] show sequence

Chromosome: 1; Position: 8399298 [Map]; Strand: w
- AT1G23740.1 - [+] show detail - Oxidoreductase, zinc-binding dehydrogenase family protein
  Distance: 0; Region: exon1 (CDS)
- AT1G23750.1 - [+] show detail - Nucleic acid-binding, OB-fold-like protein
  Distance: -853; Region: promoter

GGGANAAACT AACAAAATCG GTTATACGAT AACGGTCGGT ACGGGATTTT 
CCCATCCTAC TTTCATCATC GACGGGATTA AGAGCCGCCG CAACAACTTT 
AATCAAAACC TGATCTTCTT TAATCTCCGG CACAACAATG TTACTCTCCA 
GCTTCAGAAC ATCAACTCCG CCGTAGTCAC TATACACCCA CGCCTTCATC 
TCTTTCGGAA TCGAAGCATC CGCCGTGACA TTGACCGCCG CTGAAGCGCT 
CTGAGAGCTC GCCGAGATTT TCAAGAATTT CTTGCTGACT GTTTGCACGC 
AAGATCCGAA TCTAACTCTG TTGATTTGGT AAACCGGCGA TTTTGTTGTG 
AGAGAACAAT AATGAAGAAG AGGCGTCTCA CGGCGGAGTA CGGGAGTTGT 
GGCGGTGGTT GTTGCAAGCG CTGCGTTCAT TTTTCAGTCT GCCACTAGTT 
TTGTCTAAAA GGCTTATCTC TTTCGCTTTC CTCTGTTTTT AAAATACTCT 
GTTTCGTGGC TTTCTTTGAT TGGTTGATAT TTTCTTGTGG TTGTCATTTT 
AATGTTTATA TCACAAATAT TGTGGCCCAT AATCGTTTTT GATCTGGTGC 
TGATTTTGTG ATTCATCTTT GTTTCATTTC TTTTAGAACT ACAGAAGTCT 
AGAACAATCA CAAAACACTT CGGTTTTTGA ACATTACAAT GTACAATTTT 
TACGTAAGAA GATACAATCG ACATTAAATG GGCCTAAACT TTAAATTGGG 
CTTTATGAAT AAGCCCAA

3 prime edge [+] show sequence

Chromosome: 1; Position: 8399285 [Map]; Strand: w
- AT1G23740.1 - [+] show detail - Oxidoreductase, zinc-binding dehydrogenase family protein
  Distance: 0; Region: exon1 (CDS)
- AT1G23750.1 - [+] show detail - Nucleic acid-binding, OB-fold-like protein
  Distance: -866; Region: promoter

ATGAAAACGG TAGAGGTATT TTACCGACCG TTACCGACCG TTTTCATCCC 
TTTCGGCAAG GGAAATTTAA AGCCACTGAT TCGCCTCTCC CGGTAAATGC 
AAATTCAAAT CTCTCTCTCT CACTCTTTTT GAAGGTTTCG GATTCTTTAA 
CATTTTGAAT CTTTCGTCGG AGTAGACTGT TCCGGGATAC GACGTTGCCG 
GAGTAGTGGT GAAAGTGGGA AGTGCNGGTG AAGGATTTGA AAGAAGGAGA 
TGAAGTTTAT GCTAACGTGA GCGAGAAAGC ATTGGAAGGT CCAAAGCAGT 
TTGGTTCTTT AGCGGAGTAC ACGGCCGTGG AAGAGAAGTT ATTAGCTTTA 
AAACCTAAAA ACATCGATTT TGCGCAAGCT GCAGGGCTTC CGTTGGCGAT 
AGAAACCGCT GATGAAGGTT TAGTTAGGAC TGAATT

AT1G23740.1

Model type: Protein coding
Short Description: Oxidoreductase, zinc-binding dehydrogenase family protein
Computational Description: Oxidoreductase, zinc-binding dehydrogenase family protein; FUNCTIONS IN: oxidoreductase activity, zinc ion binding; INVOLVED IN: response to cold; LOCATED IN: in 6 components; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: GroES-like (InterPro:IPR011032), Alcohol dehydrogenase GroES-like (InterPro:IPR013154), Quinone oxidoreductase/zeta-crystallin, conserved site (InterPro:IPR002364), Alcohol dehydrogenase, C-terminal (InterPro:IPR013149), Alcohol dehydrogenase superfamily, zinc-containing (InterPro:IPR002085); BEST Arabidopsis thaliana protein match is: Oxidoreductase, zinc-binding dehydrogenase family protein (TAIR:AT4G13010.1); Has 40144 Blast hits to 39997 proteins in 2741 species: Archae - 622; Bacteria - 25898; Metazoa - 1494; Fungi - 3833; Plants - 1284; Viruses - 3; Other Eukaryotes - 7010 (source: NCBI BLink).
Link: InterPro Scan - TAIR

AT1G23750.1

Model type: Protein coding
Short Description: Nucleic acid-binding, OB-fold-like protein
Computational Description: Nucleic acid-binding, OB-fold-like protein; CONTAINS InterPro DOMAIN/s: Nucleic acid-binding, OB-fold-like (InterPro:IPR016027), Nucleic acid-binding, OB-fold (InterPro:IPR012340); BEST Arabidopsis thaliana protein match is: Nucleic acid-binding, OB-fold-like protein (TAIR:AT1G10590.2); Has 249 Blast hits to 249 proteins in 61 species: Archae - 55; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 169; Viruses - 0; Other Eukaryotes - 25 (source: NCBI BLink).
Link: InterPro Scan - TAIR