1. Home
  2. Mutant Lines
  3. 52-1207-1

52-1207-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 2; Position: 306957 [Map]; Strand: w
      • AT2G01680.1 - [+] show detail - Ankyrin repeat family protein
        Distance: 0; Region: intron1 (CDS)
    Flanking Genome Sequence: 52-1207-1 - 5-prime edge 
    CTTTTCATGT CGCTGCCAAG CGAGGTCACT TGGGTATGTC TCACTAATTC 
    TGACTTCAAA TCTTCAAACT TTGGCTCTCT GATTATGATT TTGAATCTGA 
    AATTGCTGAA AATGGATTTG AATTTCGTAG TTTGAAGATA TTTTGATGTG 
    GCTCTGCTTA TGATCTCCAG GAATTGTGAA GGAGTTACNT GAGACTATGG 
    CCAGAGCTTT GCAGAATCTG CGACGCTTCC AACACGAGTC CGCTTTACGC 
    AGCTGCGGTT CAAGATCACT TAGAAATAGT AAATGCAATG CTTGATGTTG 
    ATCCTAGCTG TGCAATGATT GTGAGAAAGA ACGGGAAAAC ATCTTTGCAC 
    ACTGCGGGAA GGTACGGGCT TCTTCGGATA GTGAAAGCTC TCATAGAGAA 
    AGACGCAGCG ATTGTTGGTG TTAAAGATAA GAAAGGTCAG ACTGCTCTTC 
    ACATGGCTGT TAAAGGACGA AGTTTGGAAG TAGTCGAAGA GATTTTGCAG 
    GCTGATTACA CAATATTGAA TGAGAGAGAT CGAAAAGGGA ACACTGCTTT 
    GCATATTGCT ACTCGAAAGG CGCGGCCACA GGTATTACTC CACTCCTTTC 
    TTAGCTTCTT GTATTGCTAG TTAGCTTTCA AGAACAGGGG GTTGACACAT 
    AAATGCCTTT TGTGTTTTGT TTATTAGATA ACGAGCTTAT TGCTGACCT

  • 3 prime edge [+] show sequence

    1. Chromosome: 2; Position: 306841 [Map]; Strand: w
      • AT2G01680.1 - [+] show detail - Ankyrin repeat family protein
        Distance: 0; Region: exon1 (CDS)
    Flanking Genome Sequence: 52-1207-1 - 3-prime edge 
    ATGAAAAGCG TTCATGTCGG ATTTGGATCT GATCTTAACT GTTTCCAAAC 
    TAGAAAACCT AATCAAGTAA CGAAAAATGT CTTCAAGATT CTCTGCGGCG 
    GAGATATAGA CGGCGGTCTC TCCGGCGTCG TTTTGCACAG ACATAAGCTC 
    AGCCACAGCA GAACACGGCG ATGACTCATC GATTAGCTCA TCTCCGGTTA 
    AATTGTCAAC TAACTGTTGA AGTTGACTAA GATCTCCTGA TCGAACAGAG 
    GAAAAGAAAG CT

AT2G01680.1

Model type
Protein coding
Short Description
Ankyrin repeat family protein
Computational Description
Ankyrin repeat family protein; INVOLVED IN: biological_process unknown; LOCATED IN: plasma membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ankyrin repeat-containing domain (InterPro:IPR020683), Ankyrin repeat (InterPro:IPR002110); BEST Arabidopsis thaliana protein match is: Ankyrin repeat family protein (TAIR:AT2G31820.1); Has 36872 Blast hits to 17947 proteins in 711 species: Archae - 48; Bacteria - 2509; Metazoa - 18623; Fungi - 3211; Plants - 2983; Viruses - 164; Other Eukaryotes - 9334 (source: NCBI BLink).
Link
InterPro Scan - TAIR