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Mutant Lines
52-1230-1

52-1230-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

5 prime edge [+] show sequence

Chromosome: 5; Position: 3157745 [Map]; Strand: w
- AT5G10100.1 - [+] show detail - Haloacid dehalogenase-like hydrolase (HAD) superfamily protein
  Distance: -235; Region: promoter
- AT5G10100.2 - [+] show detail - Haloacid dehalogenase-like hydrolase (HAD) superfamily protein
  Distance: -235; Region: promoter

GTNAAAAACT AACAAAATCG GTTATACGAT AACGGTCGGT ACGGGATTTT 
CCCATCCTAC TTTCATCCCT CCTACATAAA CCAAATTCGC AGAGTAAGCT 
GGAAAAAACA CACACCCAAG TCATCTTCAT CTTCTTCCTC TCTCTTCATC 
TTTTATTTTG TAATATCTCT ACCTTAATCT CTAGTTTTCT CAAATGGGTA 
GGCTTTGGTT TTACTTTGAT TCATCTTGAC ACTTTAACTA TCCTTCTCTT 
TGTGTAACCT ATCCTCTGTT TTTGCAGTGC GTTTTGTCGT GGAAAAACCA 
CAGATAATGT CAGCTAGTCA AAACATTGTC GTATCAGAGA CTACAATGTC 
AAGTATCATC CCCAACAACA ACAACAACAA CAACAACTCT TCTTCACAGA 
AACTCCCTCC TTGTTTAATC TCAATTTCCA AGAAAAAGCT

3 prime edge [+] show sequence
1. Chromosome: 5; Position: 3157731 [Map]; Strand: w
  - AT5G10100.1 - [+] show detail - Haloacid dehalogenase-like hydrolase (HAD) superfamily protein
    Distance: -249; Region: promoter
  - AT5G10100.2 - [+] show detail - Haloacid dehalogenase-like hydrolase (HAD) superfamily protein
    Distance: -249; Region: promoter
Flanking Genome Sequence: 52-1230-1 - 3-prime edge
```
ATGAAAACGG TAGAGGTATT TTACCGACCG TTACCGACCG TTTTGAAAGG 
TAAAAAAGTG GGACCTACTG GGCCTAATAA TGGGTTTAAA TGGGCCTACG 
CTCATTCGCG TACGTTGTAA CGTGTCCTAA TGTCAATGTC GCCGAACCAT 
GCGAGTCGTC GAATCCGCGT CTCTGCGGTT GGATTATTGC AAATTTAAAA 
CATTTGTACA TTAGATTTGG TTAAGAAAAG TATACTATAT ATGATTTCCT 
TCATTCGGTA TAAATCTCAA AAAAAGAAAA ATTATATTAT TGTTCCAGTT 
TCTATACAAA AAATTACGAA TT
```

AT5G10100.1

Model type: Protein coding
Short Description: Haloacid dehalogenase-like hydrolase (HAD) superfamily protein
Computational Description: Haloacid dehalogenase-like hydrolase (HAD) superfamily protein; FUNCTIONS IN: catalytic activity, trehalose-phosphatase activity; INVOLVED IN: trehalose biosynthetic process, metabolic process; LOCATED IN: chloroplast; EXPRESSED IN: embryo, root; EXPRESSED DURING: C globular stage; CONTAINS InterPro DOMAIN/s: HAD-superfamily hydrolase, subfamily IIB (InterPro:IPR006379), Trehalose-phosphatase (InterPro:IPR003337); BEST Arabidopsis thaliana protein match is: Haloacid dehalogenase-like hydrolase (HAD) superfamily protein (TAIR:AT5G65140.1); Has 2366 Blast hits to 2362 proteins in 838 species: Archae - 41; Bacteria - 1352; Metazoa - 219; Fungi - 152; Plants - 467; Viruses - 0; Other Eukaryotes - 135 (source: NCBI BLink).
Link: InterPro Scan - TAIR

AT5G10100.2

Model type: Protein coding
Short Description: Haloacid dehalogenase-like hydrolase (HAD) superfamily protein
Computational Description: Haloacid dehalogenase-like hydrolase (HAD) superfamily protein; FUNCTIONS IN: catalytic activity, trehalose-phosphatase activity; INVOLVED IN: trehalose biosynthetic process, metabolic process; LOCATED IN: chloroplast; EXPRESSED IN: embryo, root; EXPRESSED DURING: C globular stage; CONTAINS InterPro DOMAIN/s: HAD-superfamily hydrolase, subfamily IIB (InterPro:IPR006379), Trehalose-phosphatase (InterPro:IPR003337); BEST Arabidopsis thaliana protein match is: Haloacid dehalogenase-like hydrolase (HAD) superfamily protein (TAIR:AT5G65140.1).
Link: InterPro Scan - TAIR