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52-1304-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 5; Position: 9051352 [Map]; Strand: w
      • AT5G25930.1 - [+] show detail - Protein kinase family protein with leucine-rich repeat domain
        Distance: 0; Region: exon1 (CDS)
    Flanking Genome Sequence: 52-1304-1 - 5-prime edge 
    CTCACCGGAA CTCGACTATC TCGACTTAGC AGCTAACGGA TTCTCCGGCG 
    ATATCCCTAA AAGTCTCGGA GGGATCTCGA AGCTCAAGGT ATTGAATCTG 
    TACCAGAGCG AATACGACGG TACNGTTTCC ATCGGAGATC GGAGACTTAT 
    CGGAGCTTGA AGAACTTCGA CTAGCGTTAA ACGATAAGTT TACTCCGGCT 
    AAGATTCCGA TAGAGTTTGG GAAGTTGAAG AAACTCAAGT ATATGTGGTT 
    AGAGGAGATG AATTTGATCG GAGAAATCTC ACCCGTTGTT TTCGAAAACA 
    TGACGGATCT TGAGCACGTT GACTTATCGG TCAATAACTT AACGGGTCGG 
    ATC

  • 3 prime edge [+] show sequence

    1. Chromosome: 5; Position: 9051236 [Map]; Strand: w
      • AT5G25930.1 - [+] show detail - Protein kinase family protein with leucine-rich repeat domain
        Distance: 0; Region: exon1 (CDS)
    Flanking Genome Sequence: 52-1304-1 - 3-prime edge 
    CCGGTGAGAG ACGGTCGATG TCGACGGGAA GTGAGCCGTT GAGAAGGTTC 
    TGAGAGAGAT CGAGATATTG AAGCTT

AT5G25930.1

Model type
Protein coding
Short Description
Protein kinase family protein with leucine-rich repeat domain
Computational Description
Protein kinase family protein with leucine-rich repeat domain; FUNCTIONS IN: kinase activity; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: plasma membrane, membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Leucine-rich repeat-containing N-terminal domain, type 2 (InterPro:IPR013210), Leucine-rich repeat (InterPro:IPR001611), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: receptor like protein 52 (TAIR:AT5G25910.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
Link
InterPro Scan - TAIR