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Mutant Lines
52-1312-1

52-1312-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

5 prime edge [+] show sequence

Chromosome: 5; Position: 3151137 [Map]; Strand: w
- AT5G10070.1 - [+] show detail - RNase L inhibitor protein-related
  Distance: -703; Region: promoter
- AT5G10070.2 - [+] show detail - RNase L inhibitor protein-related
  Distance: -704; Region: promoter
- AT5G10080.1 - [+] show detail - Eukaryotic aspartyl protease family protein
  Distance: 0; Region: intron1 (CDS)

GGGAAAAACT AACAAAATCG GTTATACGAT AACGGTCGGT ACGGGATTTT 
CCCATCCTAC TTTCATCATG GTACATTGTT TCTTTCATTT TCACTCTAAA 
ATTAGAAAGA AAAAAAATTC CTCTTTTTTT CTTCAAGTTT CTAAATTTTG 
TACCTTTAGA TTCGATTCCG AAGAAAAGTC GTGTTTTGAC TAACTCAATC 
TGCTACATAG TCTTTTCCTT TGGGTTTACN TTCTTTTTTG GATAATTATG 
CTAAGTTCTT GAATTTTGTA GATTAGTAGT GATTTGTTGC CTTATATGAG 
TTTTGTGTTT GATGTTTTAC TCAGGCTACA CTATACATGG ATCGACATAG 
GGACTCCAAG TGTATCGTTT CTTGTGGCTT TAGATACTGG AAGTAATCTA 
CTTTGGATTC CTTGTAACTG TGTGCAATGT GCTCCTTTAA CATCCACTTA 
TTATAGCAGC CTGGTATGTG AAATATAATG ATAAGCATAT GTTACTTAAA 
TATAGAGTTA AGATAGTGAA ATGATGACCG GTTAGCGCTT ATTTCCAGTT 
GATTGATTGG CAGATGCTTC CTCGTGTTTG GGGGCACATG TTCTGCAGGC 
TACTAAAGAT CTGAACGAGT ATAATCCATC AAGTTCAAGC ACCAGCAAAG 
TCTTTCTGTG CAGCCATAAG CTGTGTGATT CTGCTTCAGA TTGTGAGAGC 
CCAAAGGAGC AATGCCCTTA TACTGTTAAC TACCTTAGTG GAAACACCTN 
GAGCTCANGA TTACTTGTTG AAGACATCTT GC

3 prime edge [+] show sequence

Chromosome: 5; Position: 3151125 [Map]; Strand: w
- AT5G10070.1 - [+] show detail - RNase L inhibitor protein-related
  Distance: -691; Region: promoter
- AT5G10070.2 - [+] show detail - RNase L inhibitor protein-related
  Distance: -692; Region: promoter
- AT5G10080.1 - [+] show detail - Eukaryotic aspartyl protease family protein
  Distance: 0; Region: exon1 (CDS)

TGAAAACGGT AGAGGTATTT TACCGACCGT TACCGACCGT TTCATCCAAA 
GTCATTTCCA GAAGATATAG TTTTGCTTCC TTCAGATGGA ACAAGAGACT 
GAACCTTAGC ACCAAGATTC ATTCTCTGTC TTCGGAAATC ACTTTCAGCC 
AGTAACCGAT AATACTCTAA GCTCTGTTTA TTCGGCAACG AATCCGACGA 
ACTCGGAGTC TTAATCGACG CTCTTCCTTC GTCGGAGAAG CGATGAATCA 
GCCTTGATGA GAATAAGGAA GCTAGAGTCT CCTCTGTAGC TAGAAATAGC 
ACACAGAAGA GTAAAAAAGC AGATCGTGAC ACCATTTTTT CGAGCTAGGG 
TTTTGCTGAA ACAGGAAACA ATTCTCAGAT TAACACGACC TAGCACAGCT 
AATGTACAGT AAACAAGCAA ACAATCTAGA GAAATTGGAT TCTTAATCGA 
AGGATATTTG TAGAAGAGAG ATATTATATC GAGAGAGTGT GAATGTTGGT 
CGGAGAGTTA TGACTGACTG TTAGAGTGAG AGTGAGAGAG AAGAAGAAGA 
AGCT

AT5G10070.1

Model type: Protein coding
Short Description: RNase L inhibitor protein-related
Computational Description: RNase L inhibitor protein-related; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cytosol, nucleus; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF367 (InterPro:IPR007177), RNase L inhibitor RLI, possible metal-binding domain (InterPro:IPR007209); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
Link: InterPro Scan - TAIR

AT5G10070.2

Model type: Protein coding
Short Description: RNase L inhibitor protein-related
Computational Description: RNase L inhibitor protein-related; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cytosol, nucleus; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF367 (InterPro:IPR007177), RNase L inhibitor RLI, possible metal-binding domain (InterPro:IPR007209); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).
Link: InterPro Scan - TAIR

AT5G10080.1

Model type: Protein coding
Short Description: Eukaryotic aspartyl protease family protein
Computational Description: Eukaryotic aspartyl protease family protein; FUNCTIONS IN: aspartic-type endopeptidase activity; INVOLVED IN: proteolysis; LOCATED IN: anchored to plasma membrane, anchored to membrane; EXPRESSED IN: cultured cell; CONTAINS InterPro DOMAIN/s: Peptidase aspartic (InterPro:IPR021109), Peptidase aspartic, catalytic (InterPro:IPR009007), Peptidase A1 (InterPro:IPR001461), Peptidase aspartic, active site (InterPro:IPR001969); BEST Arabidopsis thaliana protein match is: Eukaryotic aspartyl protease family protein (TAIR:AT4G35880.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
Link: InterPro Scan - TAIR