53-2106-1 - RIKEN Arabidopsis Genome Encyclopedia
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53-2106-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 5; Position: 24401083 [Map]; Strand: w
      • AT5G60690.1 - [+] show detail - Homeobox-leucine zipper family protein / lipid-binding START domain-containin...
        Distance: 0; Region: exon15 (CDS)
    Flanking Genome Sequence: 53-2106-1 - 5-prime edge
    TCGACNNAAG CNCNGGAAAC TCTTTTTCTA GCTCAAGCTC GAGATGTATT 
    CTCACTATCG CGTTTCAATT CCCTTTTGAA AACAACTTGC AAGAAAATGT
    TGCTGGTATG GCTTGTCAGT ATGTGAGGAG CGTGATCTCA TCAGTTCANT
    NTNTTGNAAT GGCGATCTCA CCGTCTGGGA TAAGCCCGAG TCTGGGCTCC
    AAATTGTCCC CAGGATCTCC TGAAGCTGTT ACTCTTGCTC AGTGGATCTC
    TCAAAGTTAC AGGTGGGGGT GTAAATGTTT ACTCTCGTCT CT
  • 3 prime edge [+] show sequence

    1. Chromosome: 5; Position: 24401013 [Map]; Strand: w
      • AT5G60690.1 - [+] show detail - Homeobox-leucine zipper family protein / lipid-binding START domain-containin...
        Distance: 0; Region: exon15 (CDS)
    Flanking Genome Sequence: 53-2106-1 - 3-prime edge
    ATGAAAACGG TAGAGGTATT TTACCGACCG TTACCGACCG TTTTCATCCC 
    TCAGGTGATG GACCGACTTC AAGGCTAGAA GTTAAGTCTA GTGTACGGTG
    ATTAGCGGTT AACAGATCTT GTACATCTCC CTGTATGAGT AAGAAAAAAT
    GAGCCTTGAA ACAAACCATC TCTAAGTAAA AGAAAAATCA GTGGTACAGC
    AAAGAAGAGT ACCGTTTTAG CATCAACGGG TATGACTCGG AATCCAGAGG
    GAACAAGTGG AGCATCATCC GGGAACATCT CATTAATCGG AGCAAATATC
    AGTTCAGAAC AAGCTCCAAC GGCATTCTCG TCAATCCCGG TACAAATCTA
    CCATAAATCA TTAAGGTCAA TTTTAACTTT GAAATGGTAA AAATTTCAAG
    ATCCATTGGG TTAGAACTTA GAAGTGATAT ACCTGAAGGA GATGGACATC
    CCGTGACATA AATGCATCTT CTTGAGCAAG AGAATGACCT TCCAGTCTAA
    CAACTTCTAG CATCTAAACA TAACAAAACC AAATATATAT GTAAGAGAGA
    GACATAAAAA TGATGTTTTG TCGGCAGGTA AAGACTTTGA AGCCTTACTT
    CTTCGTGTTC AATTGTATGT CCTAGTGGCA TTATGATCTG ACTCCCAGTG
    AATCTTGTTG GTCTCATTCC CGGATAAGCA AAGCTACCAG CTTTAAGTGT
    AGCAGCGGAA TATGCATCAA CATTGAAATC AGCCCACTCA GATCGATGCT
    CTCTAAGGAA CCNGATCAAA ACCGCAGGAN GA

AT5G60690.1

Model type
Protein coding
Short Description
Homeobox-leucine zipper family protein / lipid-binding START domain-containing protein
Curator Summary
REVOLUTA regulates meristem initiation at lateral positions. a member of a small homeodomain-leucine zipper family. Has overlapping functions with PHAVOLUTA and PHABULOSA.
Computational Description
REVOLUTA (REV); CONTAINS InterPro DOMAIN/s: Homeobox (InterPro:IPR001356), Homeodomain-like (InterPro:IPR009057), Lipid-binding START (InterPro:IPR002913), MEKHLA (InterPro:IPR013978), Homeodomain-related (InterPro:IPR012287); BEST Arabidopsis thaliana protein match is: Homeobox-leucine zipper family protein / lipid-binding START domain-containing protein (TAIR:AT2G34710.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
Link
InterPro Scan - TAIR