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53-2133-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 5; Position: 25202399 [Map]; Strand: c
      • AT5G62740.1 - [+] show detail - SPFH/Band 7/PHB domain-containing membrane-associated protein family
        Distance: 0; Region: exon6 (CDS)
    Flanking Genome Sequence: 53-2133-1 - 5-prime edge 
    CTCCTGGTCC ATGAGGTATG AACACGGCAG ACGACTTGGA GCTAGCACCA 
    ATCTCCTTCA TTGTGTCAAA GTACTGTGTA ACTAGCACCA TGTCCATCAC 
    ATCTTTAGCA GTTGTCCCAG GGACATTCAC AGCGAAACCC AAAACACTGT 
    CGCGTAATCC ATCGACAATC GCCTGCCTCT GACGGGCGAT ACCAAGACCA 
    GAGAGGTACT TGGACTCAGC TTCACCTTCA GCTCTCTTAA TCTGTAGGAT 
    TTTCTCTGCC TCTGCCTTTT CGTTTGCAGC CAATCTCATC CTTGCAGCTA 
    TAAACAAGAA GCCGAAACTC AGACTCGATG ATTTACAAGT ACAAGAACAT 
    ATAACTGATG GGAAGTTTTG TTAGTTACCA GCGTTGATTT CGTTCATGGC 
    CCGTTTGACA TGTTCATCAG GCTCGATATC AACAATGAGA GTTTGCACAA 
    TCTCATAACC GTAAGCCGAC ATTGCCTACA CAAGTAACAG AGATACAATT 
    GAACACTCAT AACTTAACAC AAGCAGAAAG AGAACAAAAC AAACAAAAAG 
    ATTCTACCTT CTCGAGCTCC TCTTCAACAG CTTTCGCAAT ATCATTCTTC 
    TGCTCAAAGA CATCATCAAG AAGCAACTTC GGGACACTCG CTCTAATAAC 
    TGGAAAACAA ACAAAAACTC CGAATGATCA ATT

  • 3 prime edge [+] show sequence

    1. Chromosome: 5; Position: 25202515 [Map]; Strand: c
      • AT5G62740.1 - [+] show detail - SPFH/Band 7/PHB domain-containing membrane-associated protein family
        Distance: 0; Region: exon6 (CDS)
    Flanking Genome Sequence: 53-2133-1 - 3-prime edge 
    ACCAGGAGCG GTTCGTGATG TGGCTTCTCA GATTAGAGAT GGCCTTCTTC 
    AAGGCTCGTC CGCAAACCTG TGAAGTGAAT TCACTGATTA TGTCCTCTTT 
    TCTTTTGACT ATGGTGTGAT TATCATCTTC TTCTTTCTTT TGGATTATGT 
    TCGAACTCTT TTGTTTTGGT TTTCTTATTT CTATTTGTAT AGACTTATTG 
    GGGGTTTATA ATTCATATAG AATATTAAAA CGTGTTTAGT ACTAATTATT 
    ATTGTACACG AATTATGGTG GTGATAATCA AACTTGTGAA CCTTAATTTA 
    GA

AT5G62740.1

Model type
Protein coding
Short Description
SPFH/Band 7/PHB domain-containing membrane-associated protein family
Computational Description
HYPERSENSITIVE-INDUCED RESPONSE PROTEIN 1 (HIR1); INVOLVED IN: N-terminal protein myristoylation; LOCATED IN: plasma membrane, vacuole, membrane; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Band 7 protein (InterPro:IPR001107); BEST Arabidopsis thaliana protein match is: SPFH/Band 7/PHB domain-containing membrane-associated protein family (TAIR:AT1G69840.7); Has 5648 Blast hits to 5647 proteins in 1784 species: Archae - 171; Bacteria - 3783; Metazoa - 267; Fungi - 306; Plants - 270; Viruses - 3; Other Eukaryotes - 848 (source: NCBI BLink).
Link
InterPro Scan - TAIR