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53-2231-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 2; Position: 19268141 [Map]; Strand: w
      • AT2G46890.1 - [+] show detail - Protein of unknown function (DUF1295)
        Distance: 0; Region: exon1 (5UTR)
    Flanking Genome Sequence: 53-2231-1 - 5-prime edge 
    TAGAATACGA TAGAAGGAAG TGGAGCAAGA AATGCGACAA TGGCGTTTCT 
    AAGATTCCGA TTCATTTTCT CTCGAATAAG TCGTTGATGT TGGGTTGGCC 
    TGTAGGAAGG AGAAAGAGAA TGCAATTTAT AAACTTGAGC TTAAAGAATA 
    TCTTTGGACT TTTGGGTTGG GTTCTTTGTG GCGTGTATGG GCCCATGTTG 
    GCCCACTTTG ATCACTGATA TGATTAGAGT CTTCTGTTTA ATTATACTTT 
    TGGTGAAAAT TAAAATATGA TCAACTGTAG ATAAAGATAT TAGCTTTTTG 
    TAAAAGAGCC GAAAAAGTCA GTAATGAAGA AAATAATTGG ACTATGATTT 
    TGTATCGTAA TGATTATGGT ATGAGATTTC TGACTATTAA GTAATGAAAG 
    TAATAGTGTA AAATATATAC ATTAAACAAT ATAAACTCAA AAATTATGAA 
    ATGTAAGTGG TTAAGCAGAA ATAGGGACAA ATGATTAACA AATTTCAGAG 
    CATGGGGAAA GGGAATCGCA ATAATAATAA CTAGGATTTA ATCCGCGGTA 
    AACCGCGGAC AATCGGTTTA TTTGGTTTTT ATACTAAATA TTTGAATAAA 
    TTTGATATCT TAAATTTATA AATATAAATT TTTTAATCAA ACATAACTAA 
    ATAATAATTG GGATTTTTTT TTGT

  • 3 prime edge [+] show sequence

    1. Chromosome: 2; Position: 19268025 [Map]; Strand: w
      • AT2G46890.1 - [+] show detail - Protein of unknown function (DUF1295)
        Distance: 0; Region: exon1 (CDS)
    Flanking Genome Sequence: 53-2231-1 - 3-prime edge 
    GTATTCTACC TCACCTTTCT CAGTAATTAC TCTTCATCTN ACNAGACAGA 
    GCTCTCTTCT ATTCAATCAT GGTGTTTGAA TCATCCTCTT CTATTAGCAA 
    ACCTTCTCTT CTTCTTAAAC GTCAATGTGC TCTTCTGGGT CATCGGTTTA 
    CTCCAATCTA GCCACTGGGT ACGCATCCAT AGTCTCCAAA TCTGTTACCC 
    ATTTGTTAAA ATTCGCAATT TTTTAGTTTT TGAAAAAATT CGTTAATTTT 
    GCAGATGATC GATGTGTATT GGACAGTGAT ACCTGTAATG CTGGTTCATT 
    ACTTCGCTTC GCATCCATTG TCACAGTACA ATAAGCTGAG ATCCATGATT 
    GTCATAACTC TGACATGGAT TTGGAGCATT AGGTTGACTC ATAACTAC

AT2G46890.1

Model type
Protein coding
Short Description
Protein of unknown function (DUF1295)
Computational Description
FUNCTIONS IN: oxidoreductase activity, acting on the CH-CH group of donors; INVOLVED IN: lipid metabolic process; LOCATED IN: endomembrane system, integral to membrane, cytoplasm; CONTAINS InterPro DOMAIN/s: 3-oxo-5-alpha-steroid 4-dehydrogenase, C-terminal (InterPro:IPR001104), Protein of unknown function DUF1295 (InterPro:IPR010721); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF1295) (TAIR:AT1G18180.1); Has 1895 Blast hits to 1895 proteins in 350 species: Archae - 2; Bacteria - 474; Metazoa - 74; Fungi - 141; Plants - 112; Viruses - 0; Other Eukaryotes - 1092 (source: NCBI BLink).
Link
InterPro Scan - TAIR