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Mutant Lines
53-2247-1

53-2247-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

5 prime edge [+] show sequence

Chromosome: 5; Position: 23502338 [Map]; Strand: c
- AT5G58080.1 - [+] show detail - response regulator 18
  Distance: 0; Region: exon5 (CDS)

GTCATAGCTG GCAAGGGAAT TTGAACACAA CCAGATTCCC ACCGAGTTCC 
TTACCACTAA ATCTTGCTTT CTTGCCGGAT CAAGTGACAT GTGCAGGGAA 
CAATCTGGGA GATTGTACTT CTTTGGTTTC TGCAGAGAAT CCTGGTGGAG 
AGATGCAGTG TGATCCTCAA TTACTTGGCG GCTTCATGCA GAACGTGAAT 
CCGTTAGGCG GACAGAAATG GGAGCAACAG AACTGCACCA TGCTGAACAA 
TCCATTCGGT AACATTGAGT ATCCTCTACC CGCAGATAAC ATGGTTTTCA 
GAGACAACAA TTCAACCAGA AGCAAAGGCT TGGATGAGTC ACTGATGAAC 
CCAATAGACA ACAGTCAAGA GTATGTTGGA AAAGCTACTA CAATGCTGGA 
TC

3 prime edge [+] show sequence
1. Chromosome: 5; Position: 23502454 [Map]; Strand: c
  - AT5G58080.1 - [+] show detail - response regulator 18
    Distance: 0; Region: exon5 (CDS)
Flanking Genome Sequence: 53-2247-1 - 3-prime edge
```
GCTATGACCA GGAAATCTAG ATAAGCCTTG GAAACTGATG TTTGGGGAGG 
CAGAGTTGGA CGGAGTTCCC TCGATGCAAG GCTGAATT
```

AT5G58080.1

Model type: Protein coding
Short Description: response regulator 18
Curator Summary: member of Response Regulator: B- Type
Computational Description: response regulator 18 (RR18); CONTAINS InterPro DOMAIN/s: Response regulator, plant B-type (InterPro:IPR017053), Myb-like DNA-binding domain, SHAQKYF class (InterPro:IPR006447), CheY-like (InterPro:IPR011006), Myb, DNA-binding (InterPro:IPR014778), Homeodomain-like (InterPro:IPR009057), Signal transduction response regulator, receiver domain (InterPro:IPR001789), HTH transcriptional regulator, Myb-type, DNA-binding (InterPro:IPR017930), Homeodomain-related (InterPro:IPR012287); BEST Arabidopsis thaliana protein match is: response regulator 12 (TAIR:AT2G25180.1); Has 83273 Blast hits to 82938 proteins in 2948 species: Archae - 359; Bacteria - 74242; Metazoa - 38; Fungi - 293; Plants - 2583; Viruses - 2; Other Eukaryotes - 5756 (source: NCBI BLink).
Link: InterPro Scan - TAIR