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53-2365-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 5; Position: 26266733 [Map]; Strand: c
      • AT5G65690.1 - [+] show detail - phosphoenolpyruvate carboxykinase 2
        Distance: 0; Region: exon2 (CDS)
    Flanking Genome Sequence: 53-2365-1 - 5-prime edge 
    AGTTGAGCTA TATTCAAATG TAAATATACC TGACGGATTG AAGCATGGTC 
    TCGCTGGAGA CAGGAGTAGT CGGACCACTA GTTCCGCTGA CTCCGCTGGC 
    GCTGCCATCT CTAAGAGGAG TGGTAGGGGC AGATCGTTTC TTCTGGAGAC 
    TGTGAAGCTC GTCGATGGTC TGAAAGTTGA CCCGCGGTGC GATGTCATCC 
    TGGCAGACGT CTGCCGGCCC TGGAGATTTG CCGCCCTTCT CAGTCGTGAT 
    CCTCGGAAGC GCATCACGGG CCGCCGCAGC CGAGAAACTG AAGTCTCCAC 
    CGGTACTTTC GTTTCCGTTT CCCGCCATTT CTACTAACTT GGGATTAAGA 
    TTAAACAACA CAATTAACAC AAACACACGT ATAAACAAAG TATATACACG 
    TATATGAATT TAAAGAGAGG TATGAAGAAC AATGTTAGTA CCGAAATGTG 
    TCTTTCTTCT TTTGTTTTGT AGAAGATTA

  • 3 prime edge [+] show sequence

    1. Chromosome: 5; Position: 26266849 [Map]; Strand: c
      • AT5G65690.1 - [+] show detail - phosphoenolpyruvate carboxykinase 2
        Distance: 0; Region: intron2 (CDS)
    Flanking Genome Sequence: 53-2365-1 - 3-prime edge 
    GCTCAACTTC CAAAAAACAC AATTTATTTT CAATAATTAA TGGGGAATGT 
    AAAAAGTTAT TAGGCCAATC TATGTTGACT AATTTTACAA ATCACAAAAT 
    TATAAGGAAT CGTGATTTAA GCAAAAAAAG ATCTTTGATT TGAAGATTAA 
    ACATGTGAAA TAGCGTAATG ATATATATAG TGGTTTCTCA TAATCGTATG 
    ATTGAATTTT GTTTAGTTTT GCATGCAATC ATAAAAATAA AAATAAAAAA 
    ATGAATTTTG AGAAAACAAT GATACGAATG CATAATTTGG TGAAATATTG 
    GACAGTGCAT CGTTGGCTTC GTTGACGAGA GAGACAGGAC CGAAGTTAAT 
    AAGAGGAGAT CCGACTTCGG CAGCTAAAGT AGCACACGTG CCAGTGACTC 
    CTACGTCACT TCCGGCTGCT GACGTCAGCG ACAGTGGCTT GAAGTTCACT 
    CACATCCTTC ACAACCTCTC TCCCGCCGGT AATACATCCC TAAAACGCCA 
    CCGTTTTAAC TAAGAGCCCT ATTTTTAATG TTG

AT5G65690.1

Model type
Protein coding
Short Description
phosphoenolpyruvate carboxykinase 2
Curator Summary
Encodes a putative phosphoenolpyruvate carboxykinase (ATP-dependent).
Computational Description
phosphoenolpyruvate carboxykinase 2 (PCK2); FUNCTIONS IN: phosphoenolpyruvate carboxykinase activity, purine nucleotide binding, phosphoenolpyruvate carboxykinase (ATP) activity, ATP binding; INVOLVED IN: gluconeogenesis; LOCATED IN: cellular_component unknown; EXPRESSED IN: stem, male gametophyte, root, flower, trichome; EXPRESSED DURING: seedling growth; CONTAINS InterPro DOMAIN/s: Phosphoenolpyruvate carboxykinase, N-terminal (InterPro:IPR008210), Phosphoenolpyruvate carboxykinase (ATP), conserved site (InterPro:IPR015994), Phosphoenolpyruvate carboxykinase, ATP-utilising (InterPro:IPR001272), Phosphoenolpyruvate carboxykinase, C-terminal (InterPro:IPR013035); BEST Arabidopsis thaliana protein match is: phosphoenolpyruvate carboxykinase 1 (TAIR:AT4G37870.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Link
InterPro Scan - TAIR