1. Home
  2. Mutant Lines
  3. 53-2396-1

53-2396-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 5; Position: 24737886 [Map]; Strand: c
      • AT5G61510.1 - [+] show detail - GroES-like zinc-binding alcohol dehydrogenase family protein
        Distance: 0; Region: intron3 (CDS)
    Flanking Genome Sequence: 53-2396-1 - 5-prime edge 
    GGGAAAAACT AACAAAATCG GTTATACGAT AACGGTCGGT ACGGGATTTT 
    CCCATCCTAC TTTCATCAGA AGTTTTCATT CCTATTTCTA GGAAGTTATT 
    AATAAGAAGA CCAAGAGCAG GATTTGTGTC TTCTTGCCTG TTGAACAGAG 
    TAGAGTTTTG TTATATTGGT CGCGTTTTTC AAAGATC

  • 3 prime edge [+] show sequence

    1. Chromosome: 5; Position: 24737879 [Map]; Strand: c
      • AT5G61510.1 - [+] show detail - GroES-like zinc-binding alcohol dehydrogenase family protein
        Distance: 0; Region: intron3 (CDS)
    Flanking Genome Sequence: 53-2396-1 - 3-prime edge 
    ATGAAAACGG TAGAGGTATT TTACCGACCG TTACCGACCG TTTTCATCCG 
    GAATGAAAAC TAACCTTGAA GCAACGGCGA AGGAGAAACT GTGCAGTCAT 
    ACCCTTGAGC ATGATTGATG CTGCAACGAT AGGATCAATA GATGAAGGAA 
    CAGGAACCAC TTTATCCGCT GGAAGGATTT GTTCCTCAGC ATACGCACCC 
    ATCGGATTTC CAGCATAAGC AACGAGATCA CCGATCATTC TGCCAGTCAA 
    TCCCGACCCA ACAGCTACCA CCTCTCCAAC AGCCTCCATA CCTATGATCA 
    GAAATGGACC ATTAGTTCAG AAAAGAAAAA AAAATCTTTT CCGTTCTCTC 
    ATTAGGTTCT AGTAATGTCC ATACCTGGTG TGAAGGGCAT AGAAGCTGGC 
    TTGTAAACAC CTTTCCTGAA GTAAACATCA ATAAAGTTAA GCCCGATAGC 
    CTTGTTCTTC ACACGTATCT CACCCTCCTT TGGTTCCCCT ACTTCCACAT 
    CTTCCCATTT CAGAACCTTC CAATTAAATA AACAAAACCG CTATAAATAC 
    TGAAAAACAC TGATCAAACA GAATGCGAGA AACTATCACA AGTCTCTAAA 
    TCAAAGATAT CAAAGTAACC AAAGCTACGT TTGAAATACA CATCAGTGAT 
    TCTGTATATA ACCATCAATT TCGACTCAAG CTCAAATCCA AAACCTTTCA 
    CCTGGAAAAC TAGCCATTGA AAAAAGCTGA AGCT

AT5G61510.1

Model type
Protein coding
Short Description
GroES-like zinc-binding alcohol dehydrogenase family protein
Computational Description
GroES-like zinc-binding alcohol dehydrogenase family protein; FUNCTIONS IN: oxidoreductase activity, binding, catalytic activity, zinc ion binding; INVOLVED IN: cell differentiation, response to high light intensity; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: GroES-like (InterPro:IPR011032), NAD(P)-binding domain (InterPro:IPR016040), Alcohol dehydrogenase GroES-like (InterPro:IPR013154), Alcohol dehydrogenase, C-terminal (InterPro:IPR013149), Alcohol dehydrogenase superfamily, zinc-containing (InterPro:IPR002085); BEST Arabidopsis thaliana protein match is: oxidoreductase, zinc-binding dehydrogenase family protein (TAIR:AT4G21580.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).
Link
InterPro Scan - TAIR