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53-2503-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 2; Position: 19683449 [Map]; Strand: c
      • AT2G48121.2 - [+] show detail - LOCATED IN: mitochondrion; BEST Arabidopsis thaliana protein match is: Ribonu...
        Distance: 1058; Region: intergenic
      • AT2G48130.1 - [+] show detail - Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfa...
        Distance: 1617; Region: intergenic
    Flanking Genome Sequence: 53-2503-1 - 5-prime edge 
    GCCATTGAAA ACTAGATTCA GCTGAGCCCC TGAAGAAATC AAAGTGAGTT 
    GAATATATTT CTAAAAATGT GAAAATTGGT AAAAGTTTGT CCTCATTTTG 
    TTAGTTAATG TTTTCTTGAC TTTAGGAGAT GAACNTTTCA ACTGCAAAGA 
    TCCCATCACA CATTCATCTT CC

  • 3 prime edge [+] show sequence

    1. Chromosome: 2; Position: 19683571 [Map]; Strand: c
      • AT2G48121.2 - [+] show detail - LOCATED IN: mitochondrion; BEST Arabidopsis thaliana protein match is: Ribonu...
        Distance: 1180; Region: intergenic
      • AT2G48130.1 - [+] show detail - Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfa...
        Distance: 1495; Region: intergenic
    Flanking Genome Sequence: 53-2503-1 - 3-prime edge 
    GTTGCAGAAC AAAATGAAAA TGAAAATTTT AGTATCTCAA AATCTAGTTT 
    CTATTTTTTT TTGGNGACAT TAATCAATGA TTTCAAAATA ACCAAAAACC 
    TCAGAATAAA CTCAATTGCA TCTTAAAACC ACACAACTTT CATAACCTGA 
    AGAATGACGA AAAACAAAAT AATAGAGGAG GAGCATCACT ACTATTTTCA 
    TTTTTTTAGC CAATCAGAGN GCACTAGACA ACGCCCACTC GCACCAATCT 
    CGCGTCACGC GCTCCANACC ACGCCCACTC GCACNAACCT CGCGTTGAGC 
    GCGTGTGGTC GATTTCTGTA GGGGTAAACC CACAAAATCA TGCCTATTTT 
    ACATTTACTC GCTTTGTTTC TAAAACAGCC TCGAGTGAAC TTTTTTTTTT 
    TTTTTTTTTN NAANCCCNTT TTTTTTTTTN GGNNNCCCCC CCCAAANNTT 
    TTTTTTTTTT NAAANCCNNN NAANCNNAAA AAAANNCCNN NNTTTTTTAA 
    AANCCNNNNC CCCCCNCCCA AAATTTTTNN TTTTTTTNNA AAANCCTNNA 
    AAAGGGNTTN CNNAANGGTT NAANCCNCCC CCGGAAAAAN ANNCCCCTTT 
    TTTTNCCCCN NNAAAATTTN GGGCCNCCCC CCCNACCTTN GGGGNGAANA 
    GGNTTTTTTT TGGNCCCNNT TTTNNGCCGG GGGGGGNTNC CNNGGTNTTT 
    TANNGGGNGG GGGGCAAAAA NGGGGNCCCA ANANAAAG

AT2G48121.2

Model type
Protein coding
Computational Description
LOCATED IN: mitochondrion; BEST Arabidopsis thaliana protein match is: Ribonuclease III family protein (TAIR:AT4G37510.1).
Link
InterPro Scan - TAIR

AT2G48130.1

Model type
Protein coding
Short Description
Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein
Computational Description
Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein; FUNCTIONS IN: lipid binding; INVOLVED IN: lipid transport; LOCATED IN: anchored to membrane; EXPRESSED IN: hypocotyl, root, flower; EXPRESSED DURING: petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Bifunctional inhibitor/plant lipid transfer protein/seed storage (InterPro:IPR016140), Plant lipid transfer protein/seed storage/trypsin-alpha amylase inhibitor (InterPro:IPR003612), Plant lipid transfer protein/Par allergen (InterPro:IPR000528), Plant lipid transfer protein/hydrophobic protein, helical domain (InterPro:IPR013770); BEST Arabidopsis thaliana protein match is: Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein (TAIR:AT3G22600.1); Has 1201 Blast hits to 1197 proteins in 63 species: Archae - 0; Bacteria - 8; Metazoa - 1; Fungi - 0; Plants - 1190; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink).
Link
InterPro Scan - TAIR