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53-2534-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

Notice

More than one insertion position or no insertion point is expected.

  • 5 prime edge [+] show sequence

    1. Chromosome: 2; Position: 482064 [Map]; Strand: c
      • AT2G02023.1 - [+] show detail - unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biolo...
        Distance: -286; Region: promoter
      • AT2G02026.1 - [+] show detail - unknown protein; Has 30201 Blast hits to 17322 proteins in 780 species: Archa...
        Distance: 0; Region: exon1 (CDS)
      • AT2G02030.1 - [+] show detail - F-box family protein
        Distance: -271; Region: promoter
    Flanking Genome Sequence: 53-2534-1 - 5-prime edge 
    CTTGCCACCC CCAGAGACGG GCCTGTCTCG AACAAATCAC GATCCGTCGT 
    CAAGCAAGAT TAACATAACT TGTTGTGACC ATCATCACCA TGAAGAAGCA 
    GATCTTGTCG CAAACATCAT GGGCACCATC ACCAACGTAT GTTGCATCAA 
    ACATACGACC AGTGCGTTGT TCTT

  • 3 prime edge [+] show sequence

    1. Chromosome: 2; Position: 482762 [Map]; Strand: c
      • AT2G02023.1 - [+] show detail - unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biolo...
        Distance: -984; Region: promoter
      • AT2G02030.1 - [+] show detail - F-box family protein
        Distance: 0; Region: intron1 (CDS)
    Flanking Genome Sequence: 53-2534-1 - 3-prime edge 
    GTGGCAAGGT AGGCAAATGC CTAGGGTTAC TAACTAATTC ACGTTGATTC 
    CAGCCACTCT TTATGACGGT TACAAAGAAA ATATGGAAAC AGAACTTATA 
    AATTCAGCGC ACATTGAATT TCACAAGAGT CAGAAGAAAT CGATGGAGAA 
    ACTCCTTACG ATCAAACAAG TTTCTTTGTC CGCAAGAAAA GAAATCAAAC 
    GAAGAAGAAA AGAGTTTGAG AAGATCCATA TACCTAACGA AATCGTCGAA 
    GAAATCTTGG TGAGGCTGCC GGTGAAATCG CTCACGAGAT TTCAAACTGT 
    GTCAAAACAC TGGAGAACTC TGATCACGTC GAAGTATTTC GGAAAAAGAC 
    ACATGGCTCT TGAGAAAAGC AAAGGATGCA AACTCCTTTT TGTTTGTGAT 
    GATTTTGTAG ATCGTGCAGA GGACACTCTG TTTTTAAGAA CAGTTGCCTT 
    GGAGAAGACG TCAGTTTCTG AGGGAGATGA ACAAGCTTTC GAATTCGAAG 
    GATATAAGGG GTTTCTCGAT ATTTCCGAGA GCTGTGATGG CCTTGTCTGC 
    TTCTACGACA

AT2G02023.1

Model type
Protein coding
Computational Description
unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; Has 0 Blast hits to 0 proteins in 0 species (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT2G02026.1

Model type
Protein coding
Computational Description
unknown protein; Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT2G02030.1

Model type
Protein coding
Short Description
F-box family protein
Computational Description
F-box family protein; CONTAINS InterPro DOMAIN/s: F-box domain, cyclin-like (InterPro:IPR001810), F-box domain, Skp2-like (InterPro:IPR022364); BEST Arabidopsis thaliana protein match is: F-box and associated interaction domains-containing protein (TAIR:AT1G12870.1); Has 1703 Blast hits to 1685 proteins in 46 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 1701; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink).
Link
InterPro Scan - TAIR