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53-2546-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 4; Position: 176068 [Map]; Strand: w
      • AT4G00400.1 - [+] show detail - glycerol-3-phosphate acyltransferase 8
        Distance: 0; Region: exon2 (CDS)
    Flanking Genome Sequence: 53-2546-1 - 5-prime edge 
    CCTATAATCG ACCAAGATTG GATAAAAAGA TTGGAACAGT ACCTTGCAGA 
    GAGACATGAA ATCATGATCA GAGGTTCGAT CACCGAGGCC GAGATCAGGT 
    GATTCGTTAC CAAACTCTTT TAAAATGGCT AACCTCTTAA GATCACCAAC 
    AAGAACACCA GGCTTCTTCA CAAATCCAGT GGCTCTATTG GTTTTAGGGT 
    TAACTTCAAT CTCTGTTCCC AAAACTTTAT CACCTCCAAG ATAATCCTTC 
    ACAAACGCCT CCACCATCAC AATCGGATTC GCCGTCACTA CCACTTTTCT 
    CTTACACTTA TCAAACAACT CAAAACTGTC TTTCCTCACA TCCGCCGCGT 
    AAAACCTAAA CAAAGTTCAT CAGAAAAAAA CTAAAGTGAT CTACTAACAA 
    GAAAACACTC TATGTTAGAT CTCGTACCGT GGAAGAACTG CGCGAGAGAC 
    AAGTTCGATA TCGCGGATTT TGAGACCAGC GAATGAGATG AAGATGAGGA 
    TCTGGATACC AAGAGATTCG GATACGAAT

  • 3 prime edge [+] show sequence

    1. Chromosome: 4; Position: 175995 [Map]; Strand: w
      • AT4G00400.1 - [+] show detail - glycerol-3-phosphate acyltransferase 8
        Distance: 0; Region: intron2 (CDS)
    Flanking Genome Sequence: 53-2546-1 - 3-prime edge 
    ATGAAAACGG TAGAGGTATT TTACCGACCG TTACCGACCG TTTTCATTAG 
    GGTAAAGTTA AGTTGAATTA TTGAGTGTTG ATTGGTTTAG TGTAAGATGT 
    GTTTTGGAGG TAACTTGAGA ATCTAAGCAA ACGTTTGATT TGCTTGTTGA 
    TTAAGCTAGA TAATCTAATT TAACTTGTTG ACNTGGTTTA GTGTCATTAT 
    GTCTACGCGT GAATCTTATA AAAATAATGA AATTTTTGAT TTGGAAGCAA 
    TTAGTAAGGT TCATAAATGT ATCCAACCAA TCACCTTCAC GTGACCCTCT 
    GGATTATTTT TCTATCCCCA ACCACCTTAC TAGTTCCACC AACATTTTGG 
    GCTGTCCATT TAATGAACAC ATACTTGAAA TATCATAAAC AATCTTCTGT 
    TGTTTAATGC TTAGTTTTTT GAATCTTGAT TACACAATTT AGAGATATGT 
    TACATTTTCC TAGTACTTTT AGTTATAAGT TTGAAATGAA TAACGTTTTT 
    GGTATTATAA CAGAAAGGTT ACATGGTTCA TGCGACCAAG TCAGCCACAA 
    CGATTCCAAA AGAACGCTTA AAGAACCGCA TAGTCTTCCA TGATGGGCGT 
    TTAGCGCAAC GTCCAACTCC GTTAAACGCC ATTATCACAT ACCTATGGCT 
    TCCTTTTGGT TTCATCCTCT CCATCATTCG CGTCTACTTC AACCTCCCTT 
    TACCTGAAAG ATTTGTCCGT TACACTTACG AGATGCTCGG GATC

AT4G00400.1

Model type
Protein coding
Short Description
glycerol-3-phosphate acyltransferase 8
Curator Summary
Involved in cutin assembly. Is functionally redundant with GPAT4.
Computational Description
glycerol-3-phosphate acyltransferase 8 (GPAT8); FUNCTIONS IN: glycerol-3-phosphate O-acyltransferase activity, acyltransferase activity; INVOLVED IN: metabolic process, cutin biosynthetic process; LOCATED IN: endoplasmic reticulum; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Phospholipid/glycerol acyltransferase (InterPro:IPR002123); BEST Arabidopsis thaliana protein match is: glycerol-3-phosphate acyltransferase 4 (TAIR:AT1G01610.1); Has 380 Blast hits to 369 proteins in 27 species: Archae - 0; Bacteria - 6; Metazoa - 8; Fungi - 0; Plants - 360; Viruses - 0; Other Eukaryotes - 6 (source: NCBI BLink).
Link
InterPro Scan - TAIR