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53-2547-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 1; Position: 8549232 [Map]; Strand: c
      • AT1G24150.1 - [+] show detail - formin homologue 4
        Distance: -286; Region: promoter
    Flanking Genome Sequence: 53-2547-1 - 5-prime edge 
    CCTGTAAGAG CAGAGTAGTT GTTGATCTGT TCGCTTATTC TCTGTAAGGA 
    ATTGTGTCGA ATTACGAAAA TAACCTTCGT AGTGGAGCNG AAAGATATAT 
    ATAGTAAAGA AGGATGTTTT AGTCTTTGCA CGAGATTTTC AAAATCTTCC 
    TCTCAAAGAC TTCAGTGCTT AGTCTTGTTG TGCCGTGAAC TAAGTTTTGT 
    CTGGTGGGGT TGACCTTATC TTTGACTTGG TTATTTGTAA TAATATTGGT 
    TTTTAAGATT AAAGTAAAAC TGTAGAAAAA AATCGTGAAT AGTGTTTTAA 
    TTTGTCAGAC AGACTCAACT GCTACCGGAT GTTTATAACT ATATATAAAT 
    ATGATGGTGG ATTACCAAA

  • 3 prime edge [+] show sequence

    1. Chromosome: 1; Position: 8549348 [Map]; Strand: c
      • AT1G24150.1 - [+] show detail - formin homologue 4
        Distance: -170; Region: promoter
    Flanking Genome Sequence: 53-2547-1 - 3-prime edge 
    CTTACAGGCG ACGACGTCAA CAACAACCCA AAATACCAAA AACCCTCAAA 
    AGTCTCAAAC AAAACTCAAA AACCAACAAT TAAAGAAACA ACATTTCAAT 
    ATACAGATTT ACTTCCTTTT ACAGATTTTC CTAAAAAACC GAAATTGAAA 
    CAAACAAAAC CAAAAGACGT TACCTTTTTT CCATTGATTC CTCAATTCTC 
    TAAACAAATG AGTTAATCTT CCATGGCTGC CATGTTGATG CAGCCATGGC 
    CACCGTTTCT TCCTCATCTA ACCCTAGTTT TCTTAACCCT AATCCTCTTT 
    TTCCCTAATC AATCCTTTTC TCAATCCGAT TCTCCTCGAA ACATCGAAAC 
    ATTTTTCCCA AATGACACAA TCACCCCTCC AGTTCAATCT CCGGTTCTAT 
    CGCCGCCGCA AAACCCATCA TCTTCGTCAT CGGATTCAGA CGGAGGAAAT 
    ATCTTGAGGG CTGTGCTTAT AACAGCAGCA AGCACTTTAC TTGTAGCAGC 
    CGTGTTCA

AT1G24150.1

Model type
Protein coding
Short Description
formin homologue 4
Curator Summary
Encodes a group I formin. Localized to cell junctions. Polymerizes actin. Binds profilin.
Computational Description
formin homologue 4 (FH4); FUNCTIONS IN: actin binding, protein binding; INVOLVED IN: actin filament polymerization; LOCATED IN: cell-cell junction, plasma membrane; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Actin-binding FH2/DRF autoregulatory (InterPro:IPR003104), Actin-binding FH2 (InterPro:IPR015425); BEST Arabidopsis thaliana protein match is: formin 8 (TAIR:AT1G70140.1); Has 28239 Blast hits to 15205 proteins in 945 species: Archae - 44; Bacteria - 3418; Metazoa - 10057; Fungi - 3019; Plants - 7022; Viruses - 1317; Other Eukaryotes - 3362 (source: NCBI BLink).
Link
InterPro Scan - TAIR