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53-2571-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 2; Position: 19669170 [Map]; Strand: w
      • AT2G48090.1 - [+] show detail - unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biolo...
        Distance: 0; Region: exon1 (3UTR)
    Flanking Genome Sequence: 53-2571-1 - 5-prime edge 
    TAGTTTTCAT TAAAACGACA AATCCATGTC CGTACTTGTC AACACACACC 
    ACAAAACATA TACATATATA TCAATCTCTC AGGCCAGAGG ATTATTCAAA 
    TCATTAATTT GTCGAAATCC ATCACTTGAA AGTCGGGTTA GCACGAGCAA 
    TGGTGGAAGA GGAACTGAGC TTCATCTTTG CCTTCTTTAT GTACTCAGAG 
    AACTGATCTG ATGATCTCCG GCCACTACTA CCTACGTGAG AGATAGGCAC 
    ATGGTGGTGA CGATGATCAT GACGTGTCTG ATCTGTTTCA TCACTTGTCT 
    CCCACGCATC CTCCTTCATC ATATCACCGA CATTCGTCAT CGCCCTTATC 
    TTCAGCTTCG CTTTCTTTAT ATACTCGGTG AACCTCTCGT CCGTTTTGAT 
    CGTAGTATCC ACTCGAGCGA TCACCGGTTC CACCTTTGTA ATGGGTTTGG 
    CTGCCCTAGG CCTAGCCGAT GTCTCTGCAA ATTTGACGCG AACAGCCTCT 
    GCTGGTGAAG ATTTGGTGGA GATGCGACGA ACGGTTCGGA CAGGACTAGT 
    CACTGCTCTG AAG

  • 3 prime edge [+] show sequence

    1. Chromosome: 2; Position: 19669039 [Map]; Strand: w
      • AT2G48080.1 - [+] show detail - oxidoreductase, 2OG-Fe(II) oxygenase family protein
        Distance: -1947; Region: intergenic
      • AT2G48090.1 - [+] show detail - unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biolo...
        Distance: 71; Region: intergenic
    Flanking Genome Sequence: 53-2571-1 - 3-prime edge 
    ACTAATCATT TTAATAATTT TGTTGTTACA TCGGTAGCGA GTGGTTTCTT 
    TTCTTAAGAA TCATTATATG GGCTGTGAAT GGGCCGCCAA AGAAGAGTCT 
    GTTTAAGTTG ATAAAGATGA TAATAAAATG ATAATGATGA GAAAGCTTGG 
    AGTTATAACG AAATGACATG CACGATCGTT AAATCCGTTA TTAAACAATA 
    CCCCGATCGG CTCTGATTCT GAAAATGGGC GGTTTTAGTC GTACGTAACA 
    TGACGTCGTG ACCTGTACTG AATATTCATT CATTCATTAT GAAGCGATAA 
    CTCTTTTTTA ATCTGAAGCC CCCTTAACCA AAAAAGGGCA GATTCAGTTG 
    AGATTTCCTT TTCTTAATTA AATACGATTG ATTTCCTTTG ACAATTTC

AT2G48080.1

Model type
Protein coding
Short Description
oxidoreductase, 2OG-Fe(II) oxygenase family protein
Computational Description
oxidoreductase, 2OG-Fe(II) oxygenase family protein; BEST Arabidopsis thaliana protein match is: oxidoreductase, 2OG-Fe(II) oxygenase family protein (TAIR:AT4G02940.1); Has 179 Blast hits to 160 proteins in 29 species: Archae - 0; Bacteria - 0; Metazoa - 24; Fungi - 0; Plants - 151; Viruses - 0; Other Eukaryotes - 4 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT2G48090.1

Model type
Protein coding
Computational Description
unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: male gametophyte, root, flower, carpel; EXPRESSED DURING: 4 anthesis, petal differentiation and expansion stage; Has 3 Blast hits to 3 proteins in 1 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 3; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Link
InterPro Scan - TAIR