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Mutant Lines
53-2573-1

53-2573-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

5 prime edge [+] show sequence
1. Chromosome: 5; Position: 23922259 [Map]; Strand: c
  - AT5G59300.1 - [+] show detail - ubiquitin carrier protein 7
    Distance: -955; Region: promoter
  - AT5G59305.1 - [+] show detail - unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biolo...
    Distance: -942; Region: promoter
Flanking Genome Sequence: 53-2573-1 - 5-prime edge
```
CTGGCACTTG GTTTATAATG ATGATACATA ATACTTTTGG TATTATATGT 
AAAGACTATT ATCAATCGTG TTGTGGATCT TGTGAGTTGT GATTGGTTTG 
CAGTTTGCAC TATGTCGACA AGACTATCCT TATAACCTTG GATTAAATTT 
TTTTTT
```

3 prime edge [+] show sequence

Chromosome: 5; Position: 23922372 [Map]; Strand: c
- AT5G59305.1 - [+] show detail - unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biolo...
  Distance: -829; Region: promoter

CCAAGTGGTA TAAAACTAAT AACTTTATTT TTATAGATCG ATATCGAAAG 
TTCCGAGAGG ATACATTTTA AAGAAATGGT TTGGTAATGC GAGCAGTATA 
ATTACAAACA TACATAACGG TAATTCCCTG ACCAGGAAAA CGAGACCGAC 
AAACTTTGCT GGTGAAAAAA CAATATCACA AGAGACATAC AAATAAAAAT 
ATGATAAATC GTGGTGGATT TTTAAAAAAG ATTTCGTGGT GGTTATAATG 
ACACCTAAAT GATTATGACA AAGAAAAAGC TTAACTGAAA TTGAAATGAA 
GGCAGCAAAA TTTTGCCGAC GTATAGTATG TTCTCAAGTT ATAGTAGTAG 
CTACACGAAG TTGCTATAAA TGACATTAAA CTTAAATCAG GTTTAATTGC 
TCGGTTTGGT CCGGTTTTTA TTGGTCCACA TATGAACTCA ATCGGTGGTA 
ATAGGCAAAC AATTCAAAAG ATAATAGGTT CTAGATACCA AGAAAGTACC 
GATAAGGTAA TTAACAAA

AT5G59300.1

Model type: Protein coding
Short Description: ubiquitin carrier protein 7
Curator Summary: ubiquitin conjugating enzyme E2
Computational Description: ubiquitin carrier protein 7 (UBC7); CONTAINS InterPro DOMAIN/s: Ubiquitin-conjugating enzyme/RWD-like (InterPro:IPR016135), Ubiquitin-conjugating enzyme, E2 (InterPro:IPR000608); BEST Arabidopsis thaliana protein match is: ubiquitin-conjugating enzyme 13 (TAIR:AT3G46460.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Link: InterPro Scan - TAIR

AT5G59305.1

Model type: Protein coding
Computational Description: unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 8 plant structures; EXPRESSED DURING: F mature embryo stage, petal differentiation and expansion stage, E expanded cotyledon stage, D bilateral stage; Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Link: InterPro Scan - TAIR