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Mutant Lines
53-2608-1

53-2608-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

Notice

More than one insertion position or no insertion point is expected.

5 prime edge [+] show sequence

Chromosome: 2; Position: 17182186 [Map]; Strand: c
- AT2G41220.1 - [+] show detail - glutamate synthase 2
  Distance: 0; Region: exon12 (CDS)

CATATCATAT ATCAAAAATC ACATATGAAA GCATACACCT GGAAACTGGT 
ATGTACTGGA TTATCAGATC AGTATGAGAG AACAAGTACT TGGGAACCAT 
TACGAACAGC TTCACAAAGT TTTAGAAGAC CCTTCTTCAA AGATCCTTCA 
ATACCTCTAA GAATGTCAAA AAATGTGGGC AAGACTTGAG ATTTTAACTG 
TGGGATCACT GAGCAAACCC TCAAGCTCCC GTT

3 prime edge [+] show sequence

Chromosome: 2; Position: 17233790 [Map]; Strand: c
- AT2G41360.1 - [+] show detail - Galactose oxidase/kelch repeat superfamily protein
  Distance: -584; Region: promoter

TTGAAAACGG TAGAGGTATT TTACCGACCG TTACCGACCG TTTTCATCCC 
TAATGATATG TAAATGCCTG ATTATGCCTG AGCACTTATT CTCGCTGCCA 
AGATTTTGTT GCATAACAGG TGAAATTTTG TCTCTTGGTT ACGCTTACTT 
ACAGGGCATG TAAAATAGGG CCCCTACTTG GGTAATCTTG CCCACCACCA 
TCTACACNTC AGTCTGGTAG TTGCATCGGA TCATCGCTTA TTGGGACCAT 
TTTGCAAAAT TTGATCTTGT CAATTCTTGT AGTACAATAT AAATTTGACT 
ATAAAGCTTG AAAGTAAGTT ACTCCATACA GAGCTGTCCT AAACACTTGT 
TGTAACCTTG TTGCGTATGC CTTTTTCAGG TCTCTCTTGC GAGATCTGTT 
CCGTTCGTGT GTAAGCGTCT CTCTTGCCAT AAGTGGCCTA AGAAAATAAA 
ACTACAAATA TGAAAGTTTC CTTAAATTTG CAACTAATTA CTTCCAATTC 
TATTAGAACT AGATCCAAAA CTGTATTTCT TATAAAATTA GGTATTATTA 
ACCCTGCGCA GACCTGCCCC TTGCACGGCT GTTTAGTTTC TCTAACTTAT 
ATAGTCAAAG AGACAATCTG AAAAGACGTT TGATCAATGG CTAGAAACGT 
ATCGTCGTGG TCATCCCTTT CTTGTTTGCC CGACGAGATG GTTCTGAACT 
GCCTANCCCG CGTCCCGAGA CGCTACTACN AAAACATCTN TTGCGTNTCC 
GTAAGGCTCA AGTCCCTTGN GCGTACCCCT GAGCTCTACC GGATGCGATC 
C

AT2G41220.1

Model type: Protein coding
Short Description: glutamate synthase 2
Curator Summary: Encodes a gene whose sequence is similar to ferredoxin dependent glutamate synthase (Fd-GOGAT). Expression is most abundant in root.
Computational Description: glutamate synthase 2 (GLU2); FUNCTIONS IN: glutamate synthase (ferredoxin) activity; INVOLVED IN: oxidation reduction, nitrogen compound metabolic process, glutamate biosynthetic process, metabolic process; LOCATED IN: chloroplast, chloroplast envelope; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Glutamine amidotransferase, class-II (InterPro:IPR000583), Glutamate synthase, alpha subunit, C-terminal (InterPro:IPR002489), Aldolase-type TIM barrel (InterPro:IPR013785), Glutamate synthase, central-N (InterPro:IPR006982), Glutamate synthase, central-C (InterPro:IPR002932), Glutamine amidotransferase, type II (InterPro:IPR017932); BEST Arabidopsis thaliana protein match is: glutamate synthase 1 (TAIR:AT5G04140.1); Has 17295 Blast hits to 17192 proteins in 1999 species: Archae - 278; Bacteria - 5572; Metazoa - 117; Fungi - 161; Plants - 174; Viruses - 0; Other Eukaryotes - 10993 (source: NCBI BLink).
Link: InterPro Scan - TAIR

AT2G41360.1

Model type: Protein coding
Short Description: Galactose oxidase/kelch repeat superfamily protein
Computational Description: Galactose oxidase/kelch repeat superfamily protein; CONTAINS InterPro DOMAIN/s: F-box domain, cyclin-like (InterPro:IPR001810), Galactose oxidase/kelch, beta-propeller (InterPro:IPR011043), Kelch-type beta propeller (InterPro:IPR015915); BEST Arabidopsis thaliana protein match is: Galactose oxidase/kelch repeat superfamily protein (TAIR:AT2G44630.1); Has 607 Blast hits to 599 proteins in 16 species: Archae - 0; Bacteria - 0; Metazoa - 4; Fungi - 0; Plants - 603; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Link: InterPro Scan - TAIR