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53-2621-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 5; Position: 25511265 [Map]; Strand: w
      • AT5G63740.1 - [+] show detail - RING/U-box superfamily protein
        Distance: 0; Region: exon1 (CDS)
    Flanking Genome Sequence: 53-2621-1 - 5-prime edge 
    TCCGCATCCG CATCCGCATC CGCATCCGCA TCCGCATCCT CATCCTCATC 
    ACCATCACCA TCACCATCAC CATCACCATC ACCCTCACCC TCATTGTTAT 
    GATCATCATA AACCTTAATA TATTCATCTT CAGCCGTACG GCAAATACCA 
    CAAGTTGAAT TAGATAAAAC TAGATTCGAA TCAATGACAA CGGTTCTGAT 
    CCTTTTCTCC ATCTCTTCCT TATCTTCATC TACCTCNNNG ANANNN

  • 3 prime edge [+] show sequence

    1. Chromosome: 5; Position: 25511203 [Map]; Strand: w
      • AT5G63740.1 - [+] show detail - RING/U-box superfamily protein
        Distance: 0; Region: exon1 (CDS)
    Flanking Genome Sequence: 53-2621-1 - 3-prime edge 
    GATGCGGATG CGGATGCGGA TGCGGATGCG GATGCGGATG AGGACGAGGA 
    CGAGGACGAG GACGAGGACG AGGATGATGA TGATGATGAT GATGATGATG 
    ATGATGATGA TGATGATGAT GATGATNNNN NNNNNNNNNN NNNNNNCNNN 
    NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN 
    NNNNNNNNNN NNNNNTNTTN NNNNNNNNNN NNNNNNNNNT TNNTT

AT5G63740.1

Model type
Protein coding
Short Description
RING/U-box superfamily protein
Computational Description
RING/U-box superfamily protein; BEST Arabidopsis thaliana protein match is: RING/U-box superfamily protein (TAIR:AT5G63750.1); Has 179119 Blast hits to 41759 proteins in 2045 species: Archae - 1298; Bacteria - 52257; Metazoa - 41414; Fungi - 23882; Plants - 9817; Viruses - 3088; Other Eukaryotes - 47363 (source: NCBI BLink).
Link
InterPro Scan - TAIR