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53-2694-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 5; Position: 24213509 [Map]; Strand: w
      • AT5G60130.1 - [+] show detail - AP2/B3-like transcriptional factor family protein
        Distance: -551; Region: promoter
      • AT5G60130.2 - [+] show detail - AP2/B3-like transcriptional factor family protein
        Distance: -345; Region: promoter
    Flanking Genome Sequence: 53-2694-1 - 5-prime edge 
    CTGTTTCTAT ACTTGTTGCT TCAAATGGTA AAACCGTAAA AGACTACTTA 
    GAACGACTTC GTTTTAAAAG AAGATTCGTG AAAGAACCAA GGCCCGCGAA 
    AACCAATGGA CCTAAATTAT TTTGGTCCCA TTCGAGATGG GGTTTTATAG 
    TAGTCAGTGG AAGGCCTAGT GATTTCCTCC AAATCTATTT GCAACATATT 
    GTTTGGTTCT CTTTCTTATT TTGATTTGTA AGTTTGTATA CAAAAGTGGT 
    GCCAACAACA AAACACAAAC CCAAACCCAT TTGTCATTTT ACTATAATGT 
    CTTTTGAGAT TACTCCAACA CAAAGGACGA CCTTTGTCCG AACAATGTAA 
    GTACTATTTG TATGAATCCG TTGGAGGACG TTGCCCTACT TACTGCAGGC 
    AACAAAGCAA CAAGATTTGT CTAGACGGCA TAACTCAAGA GTTTGTTGCA 
    AGAGAAAACA GAGAGATTTA ATGAGACATG AACTCTATAT AGAAAGTCTT 
    AATTCAACAT GAAAACATCT CTCACGCCCA AATCCTTAGT TATAAACCAA 
    ATCCTAAGAT AGACATTTTA CCATTAGTAA CATAATAAAA ACCACTCACA 
    GCTAAGACAC ATAAGACTCA CAAAAGCTAC CATNNCGNNC CGNANCCCCN 
    GGGCCCTTTT NGNNTTTGNG NCTTNTAACA GGTNNNNCTN CTTANGCTTT 
    TAANATNNAN TTGCNG

  • 3 prime edge [+] show sequence

    1. Chromosome: 5; Position: 24213393 [Map]; Strand: w
      • AT5G60130.1 - [+] show detail - AP2/B3-like transcriptional factor family protein
        Distance: -435; Region: promoter
      • AT5G60130.2 - [+] show detail - AP2/B3-like transcriptional factor family protein
        Distance: -229; Region: promoter
    Flanking Genome Sequence: 53-2694-1 - 3-prime edge 
    AGAAACAGAG AGAAACCTNT GTTTTCAAGT TTTTGCTACA AAAGTCGAAA 
    GCCACATCAA CGGAAACCGT ACTATCTGAG AAATCGTGGG GTTTGAAGAA 
    CGTGTACTCA TCTTAAANNT AGGGTTCCAA ATCTCAGCTC TACATTGAAG 
    TAAATGTAGT

AT5G60130.1

Model type
Protein coding
Short Description
AP2/B3-like transcriptional factor family protein
Computational Description
AP2/B3-like transcriptional factor family protein; FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription, DNA-dependent; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: Transcriptional factor B3 (InterPro:IPR003340); BEST Arabidopsis thaliana protein match is: AP2/B3-like transcriptional factor family protein (TAIR:AT5G60140.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT5G60130.2

Model type
Protein coding
Short Description
AP2/B3-like transcriptional factor family protein
Computational Description
AP2/B3-like transcriptional factor family protein; FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription, DNA-dependent; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: Transcriptional factor B3 (InterPro:IPR003340); BEST Arabidopsis thaliana protein match is: AP2/B3-like transcriptional factor family protein (TAIR:AT5G60140.1).
Link
InterPro Scan - TAIR