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Mutant Lines
53-2735-1

53-2735-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

5 prime edge [+] show sequence

Chromosome: 5; Position: 23354194 [Map]; Strand: w
- AT5G57655.1 - [+] show detail - xylose isomerase family protein
  Distance: 4191; Region: intergenic
- AT5G57660.1 - [+] show detail - CONSTANS-like 5
  Distance: -1270; Region: intergenic

GTCAAACGGG CCTGTGTAAA TTTTTGGATT ATACAGTTTT TAGCCGGTAA 
ACGAAAAAGA ATGTATTTTA CTACCTAAGA AGAACATATC AGAAAGCAAA 
CATTATAAAA GAAAATATCG TATAAGTATA CNTTCATCAT TTAAGATTAT 
TGATTAGTAA AATATATATC AGAAAGCAAA CATTATATCA GAAAGCAAAC 
ATTAGAAAGA TTTAATATTT TGAGAGAAAA GATAAATTAT AAGGTATGAT 
CTTATGAGAA TTGAATCTCG AACACGTTGC TTTATAACAC ACTACAAAAT 
GTATATTTTT ATTGATAATA TATTACCGAA TCTTCATTAC TAAAACCGCA 
AAAAGAAATC TTAAGTAAAG CTATACCTTA TGATTTCTCG AAGTCAAAGT 
TTCTGTAATT AGAAAGAAAA ATCAAATTTG CTTTCATGCC GAA

3 prime edge [+] show sequence
1. Chromosome: 5; Position: 23354081 [Map]; Strand: w
  - AT5G57655.1 - [+] show detail - xylose isomerase family protein
    Distance: 4078; Region: intergenic
  - AT5G57660.1 - [+] show detail - CONSTANS-like 5
    Distance: -1383; Region: intergenic
Flanking Genome Sequence: 53-2735-1 - 3-prime edge
```
GTGCGTTTGA CCTAGGGTCT AGTTCCAAAA GGAAGAACAA AGTAAACGCA 
ACGGTTGGTA CTTAAAAAGA GAGTGAAAAG AAAAGATATA AGGCAACACT 
ATCAAAATCC TTATCTATCC ACGTATACGA AAGAGTTAGA GGAAACATAT 
TTGTACAATA GAAATATTGC GATAGATTTT TATATCACAG TTCTATCTAT 
ATATTACATA GCCAATGATA TTTATCTTTA TTCTTT
```

AT5G57655.1

Model type: Protein coding
Short Description: xylose isomerase family protein
Computational Description: xylose isomerase family protein; FUNCTIONS IN: xylose isomerase activity; INVOLVED IN: carbohydrate metabolic process; LOCATED IN: endoplasmic reticulum, plasma membrane, vacuole; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Xylose isomerase-like, TIM barrel domain (InterPro:IPR013022), Xylose isomerase (InterPro:IPR001998), Xylose isomerase, TIM barrel domain (InterPro:IPR012307); Has 2369 Blast hits to 2369 proteins in 858 species: Archae - 2; Bacteria - 1867; Metazoa - 8; Fungi - 2; Plants - 76; Viruses - 0; Other Eukaryotes - 414 (source: NCBI BLink).
Link: InterPro Scan - TAIR

AT5G57660.1

Model type: Protein coding
Short Description: CONSTANS-like 5
Computational Description: CONSTANS-like 5 (COL5); FUNCTIONS IN: sequence-specific DNA binding transcription factor activity, zinc ion binding; INVOLVED IN: regulation of transcription; LOCATED IN: intracellular; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: CCT domain (InterPro:IPR010402), Zinc finger, B-box (InterPro:IPR000315); BEST Arabidopsis thaliana protein match is: CONSTANS-like 4 (TAIR:AT5G24930.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Link: InterPro Scan - TAIR