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53-2756-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 2; Position: 19689170 [Map]; Strand: w
      • AT2G48150.1 - [+] show detail - glutathione peroxidase 4
        Distance: 0; Region: exon1 (5UTR)
    Flanking Genome Sequence: 53-2756-1 - 5-prime edge 
    TCTCTAGCTA TCTCTCTCTC TCTGTCTCTC TAGAGAAATT AGAGGGAAAG 
    ACTTTCTCTC ACGAGGAACC AACCTTTTAT TTAAGGAACC CTCTTTGACC 
    CTTTTTAAAG GGAAAGACTT CCTCCTTGTT TTTCTAGTCT TCTCTCCTTT 
    TTACTTNNTT CTTACATAAA TGTGAAATTG CATTATTGCC TTATTATAGA 
    AAAAAAATGA AAGTNTTCTC AACAATCTCT CTCTCTCTCT CTCT

  • 3 prime edge [+] show sequence

    1. Chromosome: 2; Position: 19689054 [Map]; Strand: w
      • AT2G48150.1 - [+] show detail - glutathione peroxidase 4
        Distance: 0; Region: exon1 (CDS)
    Flanking Genome Sequence: 53-2756-1 - 3-prime edge 
    GCTAGAGATG GGTGCTTCTG CTTCGGTTCC CGAGAGATCC GTCCATCAAT 
    TCACTGTAAA GGTATTCTCT TTTCGCTCAT ACTAGAGGAG GAGGTTGCAT 
    CGGCGCTGTG ATATTTGTTT ATTCCTTATC GTTGTTGTTG CTGTTGTTTC 
    CTGGGAATTA GGATAGCTCC GGCAAGGACC TGAATATGAG CATTTACCAA 
    GGGAAAGTCC TCCTCATCGT CAATGTTGCT TCCAAATGGT TCATC

AT2G48150.1

Model type
Protein coding
Short Description
glutathione peroxidase 4
Curator Summary
Encodes glutathione peroxidase.
Computational Description
glutathione peroxidase 4 (GPX4); FUNCTIONS IN: glutathione peroxidase activity; INVOLVED IN: oxidation reduction, response to oxidative stress, N-terminal protein myristoylation; LOCATED IN: cytosol; EXPRESSED IN: 6 plant structures; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Thioredoxin fold (InterPro:IPR012335), Thioredoxin-like fold (InterPro:IPR012336), Glutathione peroxidase (InterPro:IPR000889); BEST Arabidopsis thaliana protein match is: glutathione peroxidase 5 (TAIR:AT3G63080.1); Has 7346 Blast hits to 7345 proteins in 1724 species: Archae - 2; Bacteria - 3554; Metazoa - 785; Fungi - 210; Plants - 383; Viruses - 8; Other Eukaryotes - 2404 (source: NCBI BLink).
Link
InterPro Scan - TAIR