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53-2766-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 2; Position: 17739275 [Map]; Strand: c
      • AT2G42600.1 - [+] show detail - phosphoenolpyruvate carboxylase 2
        Distance: -190; Region: promoter
      • AT2G42600.2 - [+] show detail - phosphoenolpyruvate carboxylase 2
        Distance: -302; Region: promoter
    Flanking Genome Sequence: 53-2766-1 - 3-prime edge
    AGTGACAGGG ATGAAAGTAG GATGGGAAAA TCCCGTACCG ACCGTTATCG 
    TATAACCGAT TTTGTTAGTT TTATCCCGAT CGATTTCGAA CCCGAGGTAA
    AAAACGAAAA CGGAACGGAA ACGGGATATA CAAAACNGGT AAACTGGAAA
    CNGGAAACGN GTAGAGCTAG TTTCCCGACC GTTTCACCGG GATCCCGTTT
    TTAATCGGGA TGATCCCGTT TCGTTACCGT TTTGACTTCT TTTAATATTT
    CACGAAACTG AATATCATAT CTTGTTTTTT TGTTTAATTT TATCTTAATG
    CATTTGTACG AAAAAGCATC TAACAAAAAT ATGAAAAGCT TATACAGATG
    ATTAGATGCC ATATATTATC GAATATGCCA AAGGATATGC TTTCTTTGCT
    TCATATGAAT TATCTCCTAA ATGGTGAGGC AAAGCAATAT ATAGCTTCTC
    TTCTCCTTTA ATTTTAAACT TGTATATTTA CTTCCAGAGA AAAAAAAAAC
    NTNGATTCAG NATATTAACT TTACTTTTTT TTTTTTNNNA NGNGNNNNNN
    NTTNNNNNNG GGGGANNAAN ANCCNTTTTT NTTTTNNNCC CNNNNNNNAA
    AATTTTTNAA AAAANGGGNN NNNGGNNNTT NTTNTTGGGG NNAAANNNNN
    AANTTTNNNA AANNNNTNNN AANANANNNA AANNTNNTNN NNNNNNNTNN
    NNCCNNNNNN NNAANNNNNC NANANTNANG GGGG

AT2G42600.1

Model type
Protein coding
Short Description
phosphoenolpyruvate carboxylase 2
Curator Summary
Encodes one of four Arabidopsis phosphoenolpyruvate carboxylase proteins.
Computational Description
phosphoenolpyruvate carboxylase 2 (PPC2); FUNCTIONS IN: phosphoenolpyruvate carboxylase activity, catalytic activity; INVOLVED IN: tricarboxylic acid cycle; LOCATED IN: cytosol, apoplast, chloroplast, plasma membrane; EXPRESSED IN: 27 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Pyruvate/Phosphoenolpyruvate kinase, catalytic core (InterPro:IPR015813), Phosphoenolpyruvate carboxylase, active site (InterPro:IPR018129), Phosphoenolpyruvate carboxylase (InterPro:IPR001449), Phosphoenolpyruvate carboxylase, C-terminal region (InterPro:IPR021135); BEST Arabidopsis thaliana protein match is: phosphoenolpyruvate carboxylase 1 (TAIR:AT1G53310.3); Has 6860 Blast hits to 6799 proteins in 1908 species: Archae - 27; Bacteria - 2656; Metazoa - 4; Fungi - 0; Plants - 1774; Viruses - 0; Other Eukaryotes - 2399 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT2G42600.2

Model type
Protein coding
Short Description
phosphoenolpyruvate carboxylase 2
Curator Summary
Encodes one of four Arabidopsis phosphoenolpyruvate carboxylase proteins.
Computational Description
phosphoenolpyruvate carboxylase 2 (PPC2); FUNCTIONS IN: phosphoenolpyruvate carboxylase activity, catalytic activity; INVOLVED IN: tricarboxylic acid cycle; LOCATED IN: cytosol, apoplast, chloroplast, plasma membrane; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Pyruvate/Phosphoenolpyruvate kinase, catalytic core (InterPro:IPR015813), Phosphoenolpyruvate carboxylase, active site (InterPro:IPR018129), Phosphoenolpyruvate carboxylase (InterPro:IPR001449), Phosphoenolpyruvate carboxylase, C-terminal region (InterPro:IPR021135); BEST Arabidopsis thaliana protein match is: phosphoenolpyruvate carboxylase 1 (TAIR:AT1G53310.3); Has 6860 Blast hits to 6799 proteins in 1908 species: Archae - 27; Bacteria - 2656; Metazoa - 4; Fungi - 0; Plants - 1774; Viruses - 0; Other Eukaryotes - 2399 (source: NCBI BLink).
Link
InterPro Scan - TAIR