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53-2812-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 5; Position: 26220039 [Map]; Strand: c
      • AT5G65609.1 - [+] show detail - unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biolo...
        Distance: -694; Region: promoter
      • AT5G65610.1 - [+] show detail - unknown protein; Has 1807 Blast hits to 1807 proteins in 277 species: Archae ...
        Distance: 0; Region: intron2 (CDS)
    Flanking Genome Sequence: 53-2812-1 - 5-prime edge 
    TTCCAAACCA TGAATCTTTT GACGGTTTAG AAAAAGGGAT TAAGGCAAAG 
    AAATATGAGG ACATCACTAA AAGACTCTCA TAGCATATCT TCCAAGAACA 
    AGTTGTACAT CTTTATGCAT CAGAATCTTG TCTACTTAAA AGCTTATCTG 
    TCTCTCTTCC TCCATCGCTA CGAACCTCTA TTTGATAATA ACTTAATTAA 
    CTTGTTAATC TTGCCATTAA CCACAAAATC ATTAACCTTG TCTCTTTCCA 
    TCTCCCTCAA ATCAAATTCA

  • 3 prime edge [+] show sequence

    1. Chromosome: 5; Position: 26220155 [Map]; Strand: c
      • AT5G65609.1 - [+] show detail - unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biolo...
        Distance: -810; Region: promoter
      • AT5G65610.1 - [+] show detail - unknown protein; Has 1807 Blast hits to 1807 proteins in 277 species: Archae ...
        Distance: 0; Region: intron2 (CDS)
    Flanking Genome Sequence: 53-2812-1 - 3-prime edge 
    GTTTGGAAAC TTGCAATAGC CTCTGGTTGG TTGGTTGGTT GTTTCAAACG 
    TTACACTCAC AAATATAACA CAATTTAAAA ACTANACAAC GGTCAAGAAA 
    AGAGGGTTTA TTTTAAGAGT CCATTCAACA GATCACTANC ACNTGAACTT 
    TGGTTAAATA TTCTTTNAAA TCTATGGGGA CC

AT5G65609.1

Model type
Protein coding
Computational Description
unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G67245.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT5G65610.1

Model type
Protein coding
Computational Description
unknown protein; Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
Link
InterPro Scan - TAIR