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Mutant Lines
53-2828-1

53-2828-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

5 prime edge [+] show sequence

Chromosome: 2; Position: 10309431 [Map]; Strand: c
- AT2G24230.1 - [+] show detail - Leucine-rich repeat protein kinase family protein
  Distance: -4619; Region: intergenic
- AT2G24240.1 - [+] show detail - BTB/POZ domain with WD40/YVTN repeat-like protein
  Distance: -1217; Region: intergenic

AATATACTAC AGTTCTGTTA CCAAAACAAA CATATGATGT ATAAAATGAA 
TATATTACTT TACAAAGCAA CGATCAAATA TATAAGTTTC GTTCACCAAA 
TCCAAATGGA TTACATTTTT TCGGTCCTCT TGGTCTTGGC TAACCGAGAG 
AACGGGATAG GGTTTAGCTA ACGTCATTAA ACTATTTAAC ATTTTTAATA 
GGATTTTATG TTGAATTTAC TTTATATATG TCATAAATCA TTTTTGTATA 
TAACTATATA ATAAGTGTAC AAGTTCAACG TCAAGGAGGG TCATGCGGGT 
CGTGGACGGC ACACCAACGT CGGCTTCTTC TTCGTGTTTC GGTCCAAAAC 
ATGATTGAGA GTATTATATA AACCATACTT TAAATTCTCG AACTATATTA 
AGGAAAACTT AATAGTCGAC AATATTAGTT GTCCACTTGT CCCCTATTAT 
TTCCTATTAA ACTTCGATTG TTTGTACTTT GTACTTTCAA GGCACTCGTC 
TTATTGGGAT ACCTCTGTGT TTTTTTTAGT CTTTTCT

3 prime edge [+] show sequence
1. Chromosome: 2; Position: 10309554 [Map]; Strand: c
  - AT2G24230.1 - [+] show detail - Leucine-rich repeat protein kinase family protein
    Distance: -4742; Region: intergenic
  - AT2G24240.1 - [+] show detail - BTB/POZ domain with WD40/YVTN repeat-like protein
    Distance: -1094; Region: intergenic
Flanking Genome Sequence: 53-2828-1 - 3-prime edge
```
TATAACAAAA TAATATTTTT GACCCGTTTC AGATTCTGCA ACTAAAAAGT 
ATATTATTGC TAAACCTGAA CCATAATAAA CTAAGTTATA TGATTTAAAA 
TATGTTTCGA ATTTAACCGA TACNGTTGTC TTATTCGAGT GGATATTAAT 
GTCGCCAAAC GTATGCCAAT TCTGTAGCCT TATGGTGCGC AATAAATCAC 
TTTGGTCCTT TCTTATCTCC TC
```

AT2G24230.1

Model type: Protein coding
Short Description: Leucine-rich repeat protein kinase family protein
Computational Description: Leucine-rich repeat protein kinase family protein; FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, ATP binding; INVOLVED IN: transmembrane receptor protein tyrosine kinase signaling pathway, protein amino acid phosphorylation; LOCATED IN: endomembrane system; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, catalytic domain (InterPro:IPR000719), Leucine-rich repeat, typical subtype (InterPro:IPR003591), Leucine-rich repeat (InterPro:IPR001611), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Protein kinase-like domain (InterPro:IPR011009); BEST Arabidopsis thaliana protein match is: Leucine-rich repeat protein kinase family protein (TAIR:AT5G58150.1); Has 160590 Blast hits to 111718 proteins in 3143 species: Archae - 143; Bacteria - 16976; Metazoa - 54491; Fungi - 7303; Plants - 65091; Viruses - 227; Other Eukaryotes - 16359 (source: NCBI BLink).
Link: InterPro Scan - TAIR

AT2G24240.1

Model type: Protein coding
Short Description: BTB/POZ domain with WD40/YVTN repeat-like protein
Computational Description: BTB/POZ domain with WD40/YVTN repeat-like protein; FUNCTIONS IN: voltage-gated potassium channel activity; INVOLVED IN: potassium ion transport; LOCATED IN: voltage-gated potassium channel complex, membrane; EXPRESSED IN: 17 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: WD40 repeat-like-containing domain (InterPro:IPR011046), BTB/POZ fold (InterPro:IPR011333), Potassium channel, voltage dependent, Kv, tetramerisation (InterPro:IPR003131), BTB/POZ-like (InterPro:IPR000210); BEST Arabidopsis thaliana protein match is: BTB/POZ domain with WD40/YVTN repeat-like protein (TAIR:AT4G30940.1); Has 926 Blast hits to 912 proteins in 109 species: Archae - 0; Bacteria - 2; Metazoa - 686; Fungi - 7; Plants - 126; Viruses - 0; Other Eukaryotes - 105 (source: NCBI BLink).
Link: InterPro Scan - TAIR