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Mutant Lines
53-2907-1

53-2907-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

Notice

More than one insertion position or no insertion point is expected.

5 prime edge [+] show sequence
1. Chromosome: 4; Position: 299189 [Map]; Strand: c
  - AT4G00720.1 - [+] show detail - shaggy-like protein kinase 32
    Distance: -1875; Region: intergenic
  - AT4G00730.1 - [+] show detail - Homeobox-leucine zipper family protein / lipid-binding START domain-containin...
    Distance: 170; Region: intergenic
Flanking Genome Sequence: 53-2907-1 - 5-prime edge
```
AATGGGGCTT ACAGTATTCC GCCATTTTCG TTGCGCCACA GTCATTCCCT 
TGACAGACTG GTGCGATGAA CCAGACGTTA CGCCGTCGTT TTCTCCCTTC 
TGTTTGTTTG GTTCTTTTCT CTTTCTCAAT ATGTTGTTTT TAAGTTGCAG 
ACAGGAAAAG AAAAACGTAA GCAAGTGAAT TTAAATAGCT GTACGGTGGT 
GGGCTTTATT TTAAAGCCCT GGCCCGTTAT GGCTAATGAT TCCTAGATCT 
TATAACATTA ATTGGGCCTA CAACAATATC ATGTGCCATT ATTTATCCGT 
TCA
```

3 prime edge [+] show sequence

Chromosome: 4; Position: 320699 [Map]; Strand: w
- AT4G00752.1 - [+] show detail - UBX domain-containing protein
  Distance: 0; Region: intron1 (CDS)

ATCACTGGCG CGTCCGAGTC ACTCGCGATT CAGAGACTTG AGGTTCTTTC 
TTTTCTTTAT CTCTCTCTCT CTATCCGGTT CTCCGAGAGG ACGTGACTGG 
CAATTTCGTG AAATGCCTTA TGCCAAGATT GACGGGTAGT TACCTAGAGA 
AGATGTGGTT AGTTCTGCGA TCAAATGTGT AATTGCTGAT GATAGATTTG 
AAATGTCATT GAATTGGGAG AGTTAGGGTT TTAGTTAGTC TATCACTGTA 
GATCTATGAT TCGTTGCGTT ATTGCACACT ACTAGAAGTT GAAATTCTGT 
GAAATTTGAT CAGGAACATG GCAATAATCT CCCTGAAGCG ATCAATGCCC 
ACTTTAGAGA TGTCGAAAGA AGCATGTATG TTTCTCAATC TTTCTAAGAG 
TTTTTGAGTT TCGCTTCTTT GTTTTTTTGT TTTTTTGTTT TTCATGGTGT 
ATAAGCTCTT TGTTTTGTTG CCTTTCTCTT TTGGATTGNC CTTCCAGTTA 
TTATGACTCA AGCTACCAAC NNGGGCCGTN GACCACCGNN NNCCNTATAN 
NNNNTNNNTN NGNNNNNNNT TTNGATNCNA GAGCNAATNA NANNGAANCT 
CCNNNCCGGN CCGNNNACCA CC

AT4G00720.1

Model type: Protein coding
Short Description: shaggy-like protein kinase 32
Curator Summary: Encodes ASKtheta, a group III Arabidopsis GSK3/shaggy-like kinase. Functions in the brassinosteroid signalling pathway.
Computational Description: shaggy-like protein kinase 32 (SK32); FUNCTIONS IN: kinase activity; INVOLVED IN: response to brassinosteroid stimulus; LOCATED IN: cytosol, nucleus; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Serine/threonine-protein kinase domain (InterPro:IPR002290), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase, catalytic domain (InterPro:IPR000719), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635); BEST Arabidopsis thaliana protein match is: shaggy-like kinase 13 (TAIR:AT5G14640.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
Link: InterPro Scan - TAIR

AT4G00730.1

Model type: Protein coding
Short Description: Homeobox-leucine zipper family protein / lipid-binding START domain-containing protein
Curator Summary: Encodes a homeodomain protein of the HD-GLABRA2 group. Involved in the accumulation of anthocyanin and in root development
Computational Description: ANTHOCYANINLESS 2 (ANL2); FUNCTIONS IN: transcription regulator activity, sequence-specific DNA binding transcription factor activity; INVOLVED IN: root development, anthocyanin accumulation in tissues in response to UV light; LOCATED IN: nucleus; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Homeobox (InterPro:IPR001356), Homeobox, conserved site (InterPro:IPR017970), Homeodomain-like (InterPro:IPR009057), Lipid-binding START (InterPro:IPR002913), Homeodomain-related (InterPro:IPR012287); BEST Arabidopsis thaliana protein match is: homeodomain GLABROUS 1 (TAIR:AT3G61150.1); Has 12660 Blast hits to 12608 proteins in 595 species: Archae - 0; Bacteria - 0; Metazoa - 9962; Fungi - 223; Plants - 2228; Viruses - 1; Other Eukaryotes - 246 (source: NCBI BLink).
Link: InterPro Scan - TAIR

AT4G00752.1

Model type: Protein coding
Short Description: UBX domain-containing protein
Computational Description: UBX domain-containing protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: cultured cell; CONTAINS InterPro DOMAIN/s: UBX (InterPro:IPR001012), Ubiquitin interacting motif (InterPro:IPR003903), UBA-like (InterPro:IPR009060); BEST Arabidopsis thaliana protein match is: Ubiquitin-like superfamily protein (TAIR:AT4G11740.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).
Link: InterPro Scan - TAIR