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53-2913-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 5; Position: 24446717 [Map]; Strand: c
      • AT5G60770.1 - [+] show detail - nitrate transporter 2.4
        Distance: 0; Region: exon4 (CDS)
    Flanking Genome Sequence: 53-2913-1 - 5-prime edge 
    ATCATCACCC CCATCCATGT CAGCCCTTGT TCCGTGGAGA ACGTTGAGGT 
    CGAGAAGAAT ACGAGTTGGG TCAAACCAGA GCCGAAGTTT CCACCAGCTC 
    CAGTAAGACC AGAGATGATC CCTAAGGAGC NGGCGTGAGA TGAAAGGTAT 
    GATAGCAAAG GTGGCTCCAC AAGCGGCTTG AGCGCCGAGA GAGAAGAGGA 
    TCATGAAGAC AACCGCGGTC GGGAGCGTGG TGGCTCGGCC TAGCCATAGG 
    CAAAAGAAAC CGCCTAAGGT TTGGATGATC CATAGGGTCC AGAGACGGCC 
    TCTCATGCCG AAGCGTCTAG CCGCAATATC TGAGGCCCAA CCACCAATAG 
    GACGGGCAAA GAAGTTTGCC ATACCAAAGC T

  • 3 prime edge [+] show sequence

    1. Chromosome: 5; Position: 24446833 [Map]; Strand: c
      • AT5G60770.1 - [+] show detail - nitrate transporter 2.4
        Distance: 0; Region: exon4 (CDS)
    Flanking Genome Sequence: 53-2913-1 - 3-prime edge 
    GTGATGATTA TGGCGTGTAC ATTACCCGTC ACTTTAGTGC ACTTCCCGCA 
    ATGGGGAAGC ATGTTTTTGC CTTCCACGGA AGATGAAGTG AAGTCTACGG 
    AGGAGTATTA TTACATGAAA GAGTGGACAG AGACCGAGAA GCGAAAGGGT 
    ATGCATGAAG GGAGTTTGAA GTTCGCCGTG AATAGTAGAT CGGAGCGTGG 
    ACGGCGCGTG GCTTCTGCAC CGTCTCCTCC GCCGGAACAC GTTTAAGAGT 
    TTTTAAATGT GTTGTATCAG TTTCTATATA TTTCTCCAAA TGTGTAATTA 
    GTTGATCGAA TTGCATGCTT TAATTTCTTT TAAAGGATAT GCTACTCTTC 
    ATGTAATTTC GTAACAATTA TATTGTTTTT TTAAATTTCG TATTTATTTT 
    CATCTCCCTG CGA

AT5G60770.1

Model type
Protein coding
Short Description
nitrate transporter 2.4
Curator Summary
member of High affinity nitrate transporter family
Computational Description
nitrate transporter 2.4 (NRT2.4); FUNCTIONS IN: nitrate transmembrane transporter activity; INVOLVED IN: transmembrane transport; CONTAINS InterPro DOMAIN/s: Major facilitator superfamily (InterPro:IPR020846), Major facilitator superfamily MFS-1 (InterPro:IPR011701), Major facilitator superfamily, general substrate transporter (InterPro:IPR016196); BEST Arabidopsis thaliana protein match is: nitrate transporter 2:1 (TAIR:AT1G08090.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
Link
InterPro Scan - TAIR