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Mutant Lines
53-2937-1

53-2937-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

5 prime edge [+] show sequence
1. Chromosome: 5; Position: 25788264 [Map]; Strand: w
  - AT5G64520.3 - [+] show detail - homolog of X-ray repair cross complementing 2 (XRCC2)
    Distance: 0; Region: exon1 (CDS)
  - AT5G64520.1 - [+] show detail - homolog of X-ray repair cross complementing 2 (XRCC2)
    Distance: 0; Region: exon1 (CDS)
  - AT5G64520.2 - [+] show detail - homolog of X-ray repair cross complementing 2 (XRCC2)
    Distance: 0; Region: exon1 (CDS)
Flanking Genome Sequence: 53-2937-1 - 5-prime edge
```
CCGGGAACGT AGTCGAGATC ACCGGCGCAT CTACGTCAGC GAAAACTCAA 
ATCCTGATTC AAGCTGCGAT CAGTTGCATT CTTCCTAAAA CGTGGAACGG 
CATTCACTAT GGAGGATTAG GGAAACTTGG TTTTGTTTCT CGATTTGGAT 
TGTCGCTTTG ATGTTCTCCG GTTATCTCAA ATGCTAAAGC ATCGTCTTCT 
TCAAGCTAAC TGTATGCAAC TTTTGAATTT TCCCCTTCAT C
```

3 prime edge [+] show sequence

Chromosome: 5; Position: 25788148 [Map]; Strand: w
- AT5G64520.3 - [+] show detail - homolog of X-ray repair cross complementing 2 (XRCC2)
  Distance: 0; Region: exon1 (CDS)
- AT5G64520.1 - [+] show detail - homolog of X-ray repair cross complementing 2 (XRCC2)
  Distance: 0; Region: exon1 (CDS)
- AT5G64520.2 - [+] show detail - homolog of X-ray repair cross complementing 2 (XRCC2)
  Distance: 0; Region: exon1 (CDS)

GTTCCCGGCG CGTAAAGGTA CACGGTGAAG TGGCGGAATA AGCAGGAACG 
CACGGTCCTT AAGAACCCTT GATAACATCT GCTTCGCCGT CTCGTCTCCG 
CGAATCCAAC TACGCGCTTC GTCATCTCCC ATCGCTCGTC ACGCGCTAGC 
CCCGGTGTCA CTCTTCCGAC GTGAAAGTCT CGGCGACTAG CCGGAGATAA 
TGGTGAATTA AATATGGGCT TACAAGAGGA ATGCCTTACT AATGGGCCTT 
AACTAAGTTA TAATTTAGGC CCAATATTAT ATATTAAATG TGGGCTTGCA 
AATTTCCCTT CGTTTTATTT AAACAAAAAT TTAAAAATTT AACACTTATC 
CAAAAAAAAA CTTTAATGTA ATACAAAAAA TATAAGTTTA AAAACATTTT 
TTAATAAAAN AAAAAACAAG NGTTAAAAAT CTAAATTAAA TGTAAACCA

AT5G64520.1

Model type: Protein coding
Short Description: homolog of X-ray repair cross complementing 2 (XRCC2)
Curator Summary: Encodes a protein of the XRCC2 family involved in DNA repair. atxrcc2-1 Mutants are sensitive to MitomycinC but do not show fertility defects.
Computational Description: homolog of X-ray repair cross complementing 2 (XRCC2) (XRCC2); Has 216 Blast hits to 214 proteins in 83 species: Archae - 0; Bacteria - 0; Metazoa - 116; Fungi - 49; Plants - 37; Viruses - 0; Other Eukaryotes - 14 (source: NCBI BLink).
Link: InterPro Scan - TAIR

AT5G64520.2

Model type: Protein coding
Short Description: homolog of X-ray repair cross complementing 2 (XRCC2)
Curator Summary: Encodes a protein of the XRCC2 family involved in DNA repair. atxrcc2-1 Mutants are sensitive to MitomycinC but do not show fertility defects.
Computational Description: homolog of X-ray repair cross complementing 2 (XRCC2) (XRCC2); Has 215 Blast hits to 213 proteins in 83 species: Archae - 0; Bacteria - 0; Metazoa - 115; Fungi - 49; Plants - 37; Viruses - 0; Other Eukaryotes - 14 (source: NCBI BLink).
Link: InterPro Scan - TAIR

AT5G64520.3

Model type: Protein coding
Short Description: homolog of X-ray repair cross complementing 2 (XRCC2)
Curator Summary: Encodes a protein of the XRCC2 family involved in DNA repair. atxrcc2-1 Mutants are sensitive to MitomycinC but do not show fertility defects.
Computational Description: homolog of X-ray repair cross complementing 2 (XRCC2) (XRCC2); Has 186 Blast hits to 186 proteins in 75 species: Archae - 0; Bacteria - 0; Metazoa - 99; Fungi - 44; Plants - 31; Viruses - 0; Other Eukaryotes - 12 (source: NCBI BLink).
Link: InterPro Scan - TAIR