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53-2967-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 5; Position: 24152754 [Map]; Strand: c
      • AT5G59990.1 - [+] show detail - CCT motif family protein
        Distance: 0; Region: exon1 (CDS)
      • AT5G59990.2 - [+] show detail - CCT motif family protein
        Distance: 0; Region: exon1 (CDS)
    Flanking Genome Sequence: 53-2967-1 - 5-prime edge 
    GCGGAGAGAG TCTTGTTATG CAGAGGAGTG TTAGTAGCCA TAATGGCTTT 
    TCCGGTAATT ACACAGCGGC CCATGATTTC GTTAACGATG ATGATGGGCC 
    AGTGAGACGG GCCCTTAGCG CCGGAGATC

AT5G59990.1

Model type
Protein coding
Short Description
CCT motif family protein
Computational Description
CCT motif family protein; CONTAINS InterPro DOMAIN/s: CCT domain (InterPro:IPR010402); BEST Arabidopsis thaliana protein match is: CCT motif family protein (TAIR:AT5G41380.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT5G59990.2

Model type
Protein coding
Short Description
CCT motif family protein
Computational Description
CCT motif family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: shoot apex, stem, leaf whorl, flower; EXPRESSED DURING: petal differentiation and expansion stage; BEST Arabidopsis thaliana protein match is: CCT motif family protein (TAIR:AT5G41380.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Link
InterPro Scan - TAIR