1. Home
  2. Mutant Lines
  3. 53-3023-1

53-3023-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 1; Position: 5447499 [Map]; Strand: w
      • AT1G15820.1 - [+] show detail - light harvesting complex photosystem II subunit 6
        Distance: 0; Region: exon1 (CDS)
    Flanking Genome Sequence: 53-3023-1 - 5-prime edge 
    ATATAAAAGA GAATAGACTT ACGAGCCATC GAGCCATTCA GGGTCAAGGA 
    AGTTGCCACC ACCTTTAACG GCAGGGATCC AAGATTTCTT AGGCTGAGCA 
    GCCGCAGCAG CGACAATAAG AGTTTTCCTG CCAACTCTCT GAGCTCCAGT 
    GCCTACGCCG CTTCCCAATG CGGTGGCACT CCTCTTGCCT CCGGTGAGGA 
    ACGAAGAACC AAGCCCACTG AGGACAGCTC CGGAGACCGC CATCGCCATG 
    AGATCTCTAA TATACTTGCT CTGTTCTTT

AT1G15820.1

Model type
Protein coding
Short Description
light harvesting complex photosystem II subunit 6
Curator Summary
Lhcb6 protein (Lhcb6), light harvesting complex of photosystem II.
Computational Description
light harvesting complex photosystem II subunit 6 (LHCB6); FUNCTIONS IN: chlorophyll binding; INVOLVED IN: photosynthesis, nonphotochemical quenching; LOCATED IN: in 7 components; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Chlorophyll A-B binding protein (InterPro:IPR001344); BEST Arabidopsis thaliana protein match is: photosystem I light harvesting complex gene 6 (TAIR:AT1G19150.1); Has 2316 Blast hits to 2191 proteins in 220 species: Archae - 0; Bacteria - 0; Metazoa - 2; Fungi - 0; Plants - 1959; Viruses - 0; Other Eukaryotes - 355 (source: NCBI BLink).
Link
InterPro Scan - TAIR