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Mutant Lines
53-3057-1

53-3057-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

5 prime edge [+] show sequence

Chromosome: 1; Position: 4608450 [Map]; Strand: w
- AT1G13440.1 - [+] show detail - glyceraldehyde-3-phosphate dehydrogenase C2
  Distance: 0; Region: exon11 (3UTR)
- AT1G13440.2 - [+] show detail - glyceraldehyde-3-phosphate dehydrogenase C2
  Distance: 0; Region: exon11 (3UTR)

GGGAAAAACT AACAAAATCG GTTATACGAT AACGGTCGGT ACGGGATTTT 
CCCATCCTAC TTTCATCCCT TCTCGCCGGT GTAAGCTTAG GCCTTTGACA 
TGTGAACGAT AAGGTCAACG ACACGAGAAC TGTAACCCCA TTCGTTGTCG 
TACCATGACA CCAACTTCAC AAACTTGTCG CTCAATGCAA TCCCAGCCTT 
GGCATCGAAA ATGCTTGACC TATAAACACA AACCCAATAT TTCAATTATT 
TGCTCTCGCC ATTTATAAGA TCAGAAAACT GTATATCACT CTACAGACAA 
TATTTTTTAT ACCTGTTGTC ACCAACAAAG TCGGTAGACA CAACATCATC 
CTCAGTGTAT CCCAAAATTC CCTTCATTTT GCCTTCAGAT TCCTCCCTGA 
AAAGTTTTAA CCAAAATCTT TTGTAAGTAC CCAATAAATT CTAATATGAT 
ATGGTTAGGA CTGAGGGTCC TTGATGGTTC TCACTTGATG GCCTTCTTGA 
TTTCGTCGTA TGTTGCAGCT TTCTCAAGTC TAACGGTGAG ATCAACAACT 
GAGACATCAA CGGTTGGAAC ACGGAAAGAC ATTCCGGNCA ATTTTCCATT 
GANGGATGGC AACACTTTNC CAACAGNCTA TNANCAACCA TGATACAAAA 
NTCANATTCA ACATAATTTN TNAATCAAAA TCANTTNAAA CAAATNNNAN 
GCTGAAATGA TACCCTTGGC NGNNCCANTG CTGNTAGGAA NATGNNGAAG 
GAAACANNTT TTNANCTNTN NNNNCCTNNT TGNTGGCCCC NCN

3 prime edge [+] show sequence

Chromosome: 1; Position: 4608452 [Map]; Strand: w
- AT1G13440.1 - [+] show detail - glyceraldehyde-3-phosphate dehydrogenase C2
  Distance: 0; Region: exon11 (3UTR)
- AT1G13440.2 - [+] show detail - glyceraldehyde-3-phosphate dehydrogenase C2
  Distance: 0; Region: exon11 (3UTR)

ATGAAAACGG TAGAGGTATT TTACCGACCG TTACCGACCG TTTTCATCCC 
GCGAGAGTTT GTGTGTGGTT GAGTTCGTAC TGTTCTGAAT AAAAAAAAGG 
AGAAAAGAAA ACTCGAGTTG TTATGTNTTT TCACTGATTC CATGCGCAGT 
CATGAGAGTT TGTAGCTTTT GTCTTTTTGC TTTCTCTTAA TGTTTCCCTG 
CTTTATTTAC TGAAACCATT GGTTTGGTTT TTTATGTTAA TTAAGTTTTT 
AGTTCATTAC TTTCTCGTGC TAACTCAAAC CCAACTGGCA ACTGGAACAT 
TGAACGTCCT CTTCTCGTAT TTTTAATAGT CTATTTGTAC TTGAGCTTCT 
CCACCAAAAT GGTTCTTCCT AGTCATATAG CTCACATTAG GTCAATCATC 
TTCGATTGAA AGCAAAAGTT ACTGAGACGG ATTTATTGGT TGATAAGCAT 
CGCCACATTG TTTTTTAACG AATCAGCCAA GTTTGTTGAA ACGGAGGATC 
AAAAATTGGA ATTTAGTATT TCCTTGCAAT TGCGAAGATC CAATTTTTTG 
GTTGACATCA TTGTAAAATG ATTGATATTA TAATTTTATT TGCATGCTAA 
CTTTTAAAGT TAATAGGAAA CTCGTATTTT CAATAGTGAC ATGTTATTGC 
ATGTGATAAT ACGATTATTT TATTACTTTA TTAGTCGTAA ATGAAGAGTA 
ACATGCCACT ATTGAAATGG TACTCATGAG ATCACACCCT AGTTATTAAA 
GGAACATANA AGTAAAGAAG GTT

AT1G13440.1

Model type: Protein coding
Short Description: glyceraldehyde-3-phosphate dehydrogenase C2
Computational Description: glyceraldehyde-3-phosphate dehydrogenase C2 (GAPC2); FUNCTIONS IN: copper ion binding, glyceraldehyde-3-phosphate dehydrogenase activity, zinc ion binding; INVOLVED IN: response to oxidative stress, response to cadmium ion, gluconeogenesis, defense response to bacterium, glycolysis; LOCATED IN: in 8 components; EXPRESSED IN: 27 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Glyceraldehyde 3-phosphate dehydrogenase subfamily (InterPro:IPR000173), Glyceraldehyde 3-phosphate dehydrogenase family (InterPro:IPR020831), Glyceraldehyde-3-phosphate dehydrogenase, type I (InterPro:IPR006424), Glyceraldehyde 3-phosphate dehydrogenase, active site (InterPro:IPR020830), Glyceraldehyde 3-phosphate dehydrogenase, catalytic domain (InterPro:IPR020829), Glyceraldehyde 3-phosphate dehydrogenase, catalytic domain, subgroup (InterPro:IPR020832), Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain (InterPro:IPR020828); BEST Arabidopsis thaliana protein match is: glyceraldehyde-3-phosphate dehydrogenase C subunit 1 (TAIR:AT3G04120.1); Has 25382 Blast hits to 25370 proteins in 6374 species: Archae - 87; Bacteria - 10988; Metazoa - 2357; Fungi - 2864; Plants - 3864; Viruses - 0; Other Eukaryotes - 5222 (source: NCBI BLink).
Link: InterPro Scan - TAIR

AT1G13440.2

Model type: Protein coding
Short Description: glyceraldehyde-3-phosphate dehydrogenase C2
Computational Description: glyceraldehyde-3-phosphate dehydrogenase C2 (GAPC2); FUNCTIONS IN: copper ion binding, glyceraldehyde-3-phosphate dehydrogenase activity, zinc ion binding; INVOLVED IN: response to oxidative stress, response to cadmium ion, gluconeogenesis, defense response to bacterium, glycolysis; LOCATED IN: cytosol, mitochondrion, chloroplast, plasma membrane, membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Glyceraldehyde 3-phosphate dehydrogenase, catalytic domain (InterPro:IPR020829), Glyceraldehyde 3-phosphate dehydrogenase subfamily (InterPro:IPR000173), Glyceraldehyde 3-phosphate dehydrogenase family (InterPro:IPR020831), Glyceraldehyde-3-phosphate dehydrogenase, type I (InterPro:IPR006424), Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain (InterPro:IPR020828); BEST Arabidopsis thaliana protein match is: glyceraldehyde-3-phosphate dehydrogenase C subunit 1 (TAIR:AT3G04120.1); Has 25183 Blast hits to 25173 proteins in 6340 species: Archae - 41; Bacteria - 10793; Metazoa - 2402; Fungi - 2843; Plants - 3866; Viruses - 0; Other Eukaryotes - 5238 (source: NCBI BLink).
Link: InterPro Scan - TAIR