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Mutant Lines
53-3063-1

53-3063-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

5 prime edge [+] show sequence
1. Chromosome: 5; Position: 24072550 [Map]; Strand: c
  - AT5G59740.1 - [+] show detail - UDP-N-acetylglucosamine (UAA) transporter family
    Distance: 0; Region: intron2 (CDS)
  - AT5G59750.1 - [+] show detail - DHBP synthase RibB-like alpha/beta domain;GTP cyclohydrolase II
    Distance: -725; Region: promoter
  - AT5G59750.2 - [+] show detail - DHBP synthase RibB-like alpha/beta domain;GTP cyclohydrolase II
    Distance: -745; Region: promoter
Flanking Genome Sequence: 53-3063-1 - 5-prime edge
```
GTNAAAAACT AACAAAATCG GTTATACGAT AACGGTCGGT ACGGGATTTT 
CCCATCCTAC TTTCATCACC AGGAGAAGAT AATGAGAGTT CCTTATGGAG 
TGAACAAGGA GTTTTTTAAG CACTCTTTGT TTCTTGTTNT CTGCAATCGG 
CTTACTACAT CAGCTGTCTC TGCTGGTGCT TTACTGGTAA ACTAGCTAAA 
AACACCAACC TTTGTGTTTA TACTTATTTG CTAAAGTTTT ATGTAACCCT 
TTTTGGCTTT TCTTTTTTAA TTTGTAGGCT AGCAAGAAAG TTTTGGATC
```
3 prime edge [+] show sequence
1. Chromosome: 5; Position: 24072602 [Map]; Strand: c
  - AT5G59740.1 - [+] show detail - UDP-N-acetylglucosamine (UAA) transporter family
    Distance: 0; Region: intron2 (CDS)
  - AT5G59750.1 - [+] show detail - DHBP synthase RibB-like alpha/beta domain;GTP cyclohydrolase II
    Distance: -673; Region: promoter
  - AT5G59750.2 - [+] show detail - DHBP synthase RibB-like alpha/beta domain;GTP cyclohydrolase II
    Distance: -693; Region: promoter
Flanking Genome Sequence: 53-3063-1 - 3-prime edge
```
AAACAAAACC ACAATCACAA AACAAAAGAA ATTTGTAAGA AAGGGGAGAC 
ATTTCACAGA GAATGGTATC ATGAAAACAA GACAGACCTG AAGAACACCG 
TAGATTACAA GAGTAGACAT AATGCCGGAA ACTGCGAATA CACCTTTCCA 
TAATTTGTTC TCTTTCACTC CTCCGTTTAC TAATTCTGGC TCAGCCATGG 
ACCATCCACC TCTGAACACA AAACCCACCA TTAATGAACC AAATCTAATC 
ACACAATACA AGCTCCGATT TTGTAATGTA AGCGTGAGAA ATCACAGTGA 
CTAGTGACTG TAACACACCT TTGAGCTCGG AGATTTCAAG CTAGACGACG 
GATTGGTAAG AGTACAACGG CTGATCC
```

AT5G59740.1

Model type: Protein coding
Short Description: UDP-N-acetylglucosamine (UAA) transporter family
Computational Description: UDP-N-acetylglucosamine (UAA) transporter family; FUNCTIONS IN: galactose transmembrane transporter activity; INVOLVED IN: transmembrane transport; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: UAA transporter (InterPro:IPR013657); BEST Arabidopsis thaliana protein match is: UDP-galactose transporter 5 (TAIR:AT3G46180.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
Link: InterPro Scan - TAIR

AT5G59750.1

Model type: Protein coding
Short Description: DHBP synthase RibB-like alpha/beta domain;GTP cyclohydrolase II
Computational Description: DHBP synthase RibB-like alpha/beta domain;GTP cyclohydrolase II; FUNCTIONS IN: 3,4-dihydroxy-2-butanone-4-phosphate synthase activity, GTP cyclohydrolase II activity; INVOLVED IN: riboflavin biosynthetic process; LOCATED IN: chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: GTP cyclohydrolase II (InterPro:IPR000926), DHBP synthase RibB (InterPro:IPR000422), DHBP synthase RibB-like alpha/beta domain (InterPro:IPR017945); BEST Arabidopsis thaliana protein match is: GTP cyclohydrolase II (TAIR:AT5G64300.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Link: InterPro Scan - TAIR

AT5G59750.2

Model type: Protein coding
Short Description: DHBP synthase RibB-like alpha/beta domain;GTP cyclohydrolase II
Computational Description: DHBP synthase RibB-like alpha/beta domain;GTP cyclohydrolase II; FUNCTIONS IN: 3,4-dihydroxy-2-butanone-4-phosphate synthase activity, GTP cyclohydrolase II activity; INVOLVED IN: riboflavin biosynthetic process; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: GTP cyclohydrolase II (InterPro:IPR000926), DHBP synthase RibB (InterPro:IPR000422), DHBP synthase RibB-like alpha/beta domain (InterPro:IPR017945); BEST Arabidopsis thaliana protein match is: GTP cyclohydrolase II (TAIR:AT5G64300.1).
Link: InterPro Scan - TAIR