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53-3068-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 3; Position: 1703268 [Map]; Strand: c
      • AT3G05746.1 - [+] show detail - unknown protein; LOCATED IN: endomembrane system; Has 30201 Blast hits to 173...
        Distance: 0; Region: exon1 (CDS)
      • AT3G05750.1 - [+] show detail - unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biolo...
        Distance: -852; Region: promoter
    Flanking Genome Sequence: 53-3068-1 - 5-prime edge 
    ATTGCAACAC AACCAGCAAG AAGAAGCATC GAAATCGGGA GAGAAAAGAA 
    AACAACAATT TGGGAATGAT TCAATGTTTT TATGAAGCAT TGTTGTTTAT 
    AAAAAAAATT CCAAGCTTTT TACATGTAGT TCTGCTTTCC ACCAAAAAAC 
    TTATTTACAA CTTTGATCAT CATTACCCTG CTCTGTCTTG CACCAATAAT 
    CTTGTCCTTG AACTGGAGGG AAAGAGTGAA AGAGATTTTG TGCAGTACCC 
    TCAACTTGAT AGAATTTGGT AAACTAAAAT GCTAAAACAG ACTACTTCCA 
    GTGTGTGTTA CTTACGCCGC CGATTGCAAG AATTCTAACA AGTTGCAAGA 
    GTTGAAATTA ACTCGGATCG CATACACAAT GCTTCATC

  • 3 prime edge [+] show sequence

    1. Chromosome: 3; Position: 1703384 [Map]; Strand: c
      • AT3G05746.1 - [+] show detail - unknown protein; LOCATED IN: endomembrane system; Has 30201 Blast hits to 173...
        Distance: 0; Region: exon1 (CDS)
      • AT3G05750.1 - [+] show detail - unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biolo...
        Distance: -736; Region: promoter
    Flanking Genome Sequence: 53-3068-1 - 3-prime edge 
    GTTGCAATGT GCCTCCTAAA TTCGGTCAAC CTGAGGATCA GGTGAAGGTA 
    CGTTCATTTG TTGAGATGGT GGGATAGCTT GCGGTTCAAG AAACGGATTT 
    GCAATGGCAT TCTGGTTGTA GTCTCCAACC GCCAAATTTG CATGGCCAAA 
    TGGGAAGTAA AGCGAGTATG GTAATGATGG GAAAGGGACT TCAAATGTTC 
    CGGATCTGGC CCAGAAGCTG TCTGCTACTA TGTTGTTATA GTTGGTCTCT 
    AAAACTTCCG GATCAAAATA TANTTTATGT CTCCTGAAAA ATATATTATG 
    AATCATTTCA ACAAATAAGT AGCTAGAAAC AGAACCAAAC TG

AT3G05746.1

Model type
Protein coding
Computational Description
unknown protein; LOCATED IN: endomembrane system; Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT3G05750.1

Model type
Protein coding
Computational Description
unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: membrane; EXPRESSED IN: 17 plant structures; EXPRESSED DURING: 10 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G26910.1); Has 2317 Blast hits to 1467 proteins in 247 species: Archae - 4; Bacteria - 750; Metazoa - 557; Fungi - 182; Plants - 180; Viruses - 0; Other Eukaryotes - 644 (source: NCBI BLink).
Link
InterPro Scan - TAIR