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53-3075-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 2; Position: 481913 [Map]; Strand: c
      • AT2G02023.1 - [+] show detail - unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biolo...
        Distance: -135; Region: promoter
      • AT2G02026.1 - [+] show detail - unknown protein; Has 30201 Blast hits to 17322 proteins in 780 species: Archa...
        Distance: 0; Region: exon1 (CDS)
      • AT2G02030.1 - [+] show detail - F-box family protein
        Distance: -422; Region: promoter
    Flanking Genome Sequence: 53-3075-1 - 5-prime edge 
    CATACGACCA GTGCGTTGTT CTCTTCTCTC TTGGTGCGGT TTAATCATTT 
    CATAGTAACT GCCATGTCTC TCTTTCATAA AATTTTCTTA TGGTTTCCAT 
    TACAATGGAG CCGATTTCTT TGCCTCCTTC TCTTCATGGG AACGGTAAAT 
    TTCTATTTCG ATGCCGGTGT GGAGAAGTTG TTCGACGGAT C

  • 3 prime edge [+] show sequence

    1. Chromosome: 2; Position: 482029 [Map]; Strand: c
      • AT2G02023.1 - [+] show detail - unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biolo...
        Distance: -251; Region: promoter
      • AT2G02026.1 - [+] show detail - unknown protein; Has 30201 Blast hits to 17322 proteins in 780 species: Archa...
        Distance: 0; Region: exon1 (CDS)
      • AT2G02030.1 - [+] show detail - F-box family protein
        Distance: -306; Region: promoter
    Flanking Genome Sequence: 53-3075-1 - 3-prime edge 
    GTCGTATGTT TGATGCAACA TACGTTGGTG ATGGTGCCCA TGATGTTTGC 
    GACAAGATCT GCTTCTTCAT GGTGATGATG GTCACAACAA GTTATGTTAA 
    TCTTGCTTGA CGACGGATCG TGATTTGTTC GAGACAGGCC CGTCTCTGGG 
    GGTGGCAAGG TAGGCAAATG CCTAGGGTTA CTAACTAATT CACGTTGATT 
    CCAGCCACTC TTTATGACGG NTACAAAGAA AATATGGAAA CAGAACTTAT 
    AAATTCAGCG CACATTGAAT TTCACAAGAG TCAGAAGAAA TCGATGGAGA 
    AACTCCTTA

AT2G02023.1

Model type
Protein coding
Computational Description
unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; Has 0 Blast hits to 0 proteins in 0 species (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT2G02026.1

Model type
Protein coding
Computational Description
unknown protein; Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT2G02030.1

Model type
Protein coding
Short Description
F-box family protein
Computational Description
F-box family protein; CONTAINS InterPro DOMAIN/s: F-box domain, cyclin-like (InterPro:IPR001810), F-box domain, Skp2-like (InterPro:IPR022364); BEST Arabidopsis thaliana protein match is: F-box and associated interaction domains-containing protein (TAIR:AT1G12870.1); Has 1703 Blast hits to 1685 proteins in 46 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 1701; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink).
Link
InterPro Scan - TAIR