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53-3079-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 2; Position: 17374023 [Map]; Strand: w
      • AT2G41670.1 - [+] show detail - P-loop containing nucleoside triphosphate hydrolases superfamily protein
        Distance: -60; Region: promoter
    Flanking Genome Sequence: 53-3079-1 - 5-prime edge 
    TTTTGTTACA CAAACGTATC TCTATGTAAA AAATTGTAAT AAGCCCAAAC 
    TTTAATCATA TGAAGCCCAT CAAAAGCCCA AATCCTATAA CCAAATTTGG 
    ATTTATTTTG CAGTGACGAG CTGTAAAACC TTAGAAAACC CTTCTTTCGC 
    TGNTGTTGCC GGAGAAAATG GTGATGATGT TGAGGAAGAC A

  • 3 prime edge [+] show sequence

    1. Chromosome: 2; Position: 17373889 [Map]; Strand: w
      • AT2G41670.1 - [+] show detail - P-loop containing nucleoside triphosphate hydrolases superfamily protein
        Distance: -194; Region: promoter
    Flanking Genome Sequence: 53-3079-1 - 3-prime edge 
    GTTTGGACGA CCAATTTTTG TAGGAGATAG ATGGGTCTCT GGGACACTCT 
    GNTTGCTCGT TGTTATCGTA AAGGTTGTAG TAGCCTGGTT GGCATCAATG 
    GTTTGCCCAT TCCTAGCTTA TCTCATAGTT GTTTTATTTA TTAGTTCAAC 
    CTTTCAACTA ACTAATTAGC ATTTTAATTT TACCTTTTTA AAACTCATTA 
    CCCTTATAAA CTTTTGTAAT TAACTATGNT CCATTTTGGG AAATAAAATT 
    ACATTTTATC CCAAACAAAA ATTTAGCTTC CGATAACATT TTAGTTGGAT 
    TTGTTTTTAA CACTACACGT GTCACGTATG GCCATAATTC AATATTATTT 
    GAAATTCACT ACATATTAAA AACGGTAAGA CCCTGTTTCT GGTAAGAGGG 
    CTAGAACCTT TAGCACACTT ATATACATAT GATAGTACGG TTACCACTCT 
    TAATTAGTTG ATAATTGAGA AATGATCAAA TATCTGTAAC TACTTAGAAG 
    ATATTTA

AT2G41670.1

Model type
Protein coding
Short Description
P-loop containing nucleoside triphosphate hydrolases superfamily protein
Computational Description
P-loop containing nucleoside triphosphate hydrolases superfamily protein; FUNCTIONS IN: GTP binding; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; CONTAINS InterPro DOMAIN/s: GTP-binding protein, HSR1-related (InterPro:IPR002917); BEST Arabidopsis thaliana protein match is: P-loop containing nucleoside triphosphate hydrolases superfamily protein (TAIR:AT4G10650.1); Has 3980 Blast hits to 3980 proteins in 1445 species: Archae - 109; Bacteria - 2376; Metazoa - 398; Fungi - 429; Plants - 195; Viruses - 0; Other Eukaryotes - 473 (source: NCBI BLink).
Link
InterPro Scan - TAIR