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53-3102-1

RIKEN Arabidopsis Ds transposon mutant lines

Phenotypes

Morphological phenotypes

This line has NOT been observed.

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 3; Position: 18359995 [Map]; Strand: w
      • AT3G49520.1 - [+] show detail - F-box and associated interaction domains-containing protein
        Distance: 0; Region: exon1 (CDS)
    Flanking Genome Sequence: 53-3102-1 - 5-prime edge 
    CCAAAGACAA CTCGGGTCTT ATGTTATGGA ATCCGTATTT GGGGCAAACC 
    AAATGGATTC GACCCAAAAA CACATTCCAC AGAGATGACA GCTTTGCTCT 
    CGGATACGAC AACAACCGTA ACCACAAAAT CTTGAGGTTG AACGAGGAAA 
    ACGAAAGTCA TATTGATGTC TACGATTTTA GCTCTGATTC ATGGAGGACG 
    GTTCTTGATG ATAATCCCTA TAGGGATGAA CTCATTTATC AAAGTGGAGT 
    GTCTTTGAAG GGAAATGCTT ACTTTTTCGA TCGAGAGGTA ACGATAGAGG 
    CAGAAGTGGG GACAGAACAC TTGTTGATAA CAGGCATTGA AGATTATTTA 
    CGCTGTTTTG ATTTCACAAC CGAGAGATTT GGACCGCGTT TGCCTCTTCC

  • 3 prime edge [+] show sequence

    1. Chromosome: 3; Position: 18359879 [Map]; Strand: w
      • AT3G49520.1 - [+] show detail - F-box and associated interaction domains-containing protein
        Distance: 0; Region: exon1 (CDS)
    Flanking Genome Sequence: 53-3102-1 - 3-prime edge 
    GTCTTTGGGG ATGCATAACA ATAAGCCATC GCAGTGATAG ACTCGAGATA 
    TCTCGACTTG ATCATCAATA TTAGGTATGC TTATTTGTTT CATAGATGGA 
    TCAACCAAGT CTTCTTCGTC TTCGATACGG ATTTTTTGGA GATCGAATCT 
    CAAGGAACAA ACCCTAGAAT CTAGAATCAT TAACTCTAGA AACTGATTCC 
    TTGCTACTGA TTTTTTACCA AAGATCTGAT TTTTTGATAA AGCGTTCCAC 
    GTTTTACAAG TAGATCGCAC TGCTCTAAGA GATGTAAATG GAACCCAAGA 
    AAATATATCT TTTACCAAAT CATCTGGTAG ATCGGAAATT GTCGTCATTT 
    CTCCCAAGCT TCTAACTTTC TCCGGAGAGT TGTGTTTTGT TCTTC

AT3G49520.1

Model type
Protein coding
Short Description
F-box and associated interaction domains-containing protein
Computational Description
F-box and associated interaction domains-containing protein; CONTAINS InterPro DOMAIN/s: F-box domain, cyclin-like (InterPro:IPR001810), F-box domain, Skp2-like (InterPro:IPR022364), F-box associated domain, type 1 (InterPro:IPR006527), F-box associated interaction domain (InterPro:IPR017451); BEST Arabidopsis thaliana protein match is: F-box family protein (TAIR:AT3G49510.1); Has 1137 Blast hits to 1079 proteins in 26 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 1137; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Link
InterPro Scan - TAIR